HOXA7 (homeobox A7)

Identity

Other names	ANTP
	HOX1
	HOX1.1
	HOX1A
HGNC	HOXA7
Location	7p15.2
Location_base_pair	Starts at 27159863 and ends at 27162821 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	HOXA7   5108
Entrez_Gene	HOXA7  3204  homeobox A7
	Cards
GeneCards	HOXA7
Ensembl	ENSG00000122592 [Gene_View]  HOXA7 [Vega]
Genatlas	HOXA7
	Genomic and cartography
GoldenPath	HOXA7  -  7p15.2   chr7:27159863-27162821 -  7p15.2   [Description]    (hg18-March_2006)
Ensembl	HOXA7 - 7p15.2 [CytoView]
NCBI	Mapview
OMIM	142950 Disease map [OMIM]
HomoloGene	HOXA7
	Gene and transcription
Genbank	AF026397 [ ENTREZ ]
Genbank	AW793597 [ ENTREZ ]
Genbank	BC061916 [ ENTREZ ]
Genbank	BC140401 [ ENTREZ ]
Genbank	BC148692 [ ENTREZ ]
RefSeq	NM_006896 [ SRS ]    NM_006896 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
CCDS	HOXA7 CCDS - NCBI
AceView	HOXA7 AceView - NCBI
Unigene	Hs.660918 [ SRS ]    Hs.660918 [ NCBI ]
Fast-db	3187 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P31268 [ SRS]    P31268 [ EXPASY ]     P31268 [ INTERPRO ]     P31268 [ UNIPROT ] P31268 [ VarSplice FASTA ]
Prosite	PS00032 ANTENNAPEDIA [ SRS ]    PS00032 ANTENNAPEDIA [ Expasy ]
Prosite	PS00027 HOMEOBOX_1 [ SRS ]    PS00027 HOMEOBOX_1 [ Expasy ]
Prosite	PS50071 HOMEOBOX_2 [ SRS ]    PS50071 HOMEOBOX_2 [ Expasy ]
Interpro	IPR001827 Antennapedia [ SRS ]    IPR001827 Antennapedia [ EBI ]
Interpro	IPR001356 Homeobox [ SRS ]    IPR001356 Homeobox [ EBI ]
Interpro	IPR012287 Homeodomain-rel [ SRS ]    IPR012287 Homeodomain-rel [ EBI ]
CluSTr	P31268
Pfam	PF00046 Homeobox [ SRS ]    PF00046 Homeobox [ Sanger ]    pfam00046 [ NCBI-CDD ]
Smart	SM00389 HOX [EMBL]
Prodom	PD000010 Homeobox[INRA-Toulouse]
Prodom	P31268 HXA7_HUMAN [ Domain structure ]   P31268 HXA7_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P31268
HPRD	00838
	Protein Interaction databases
DIP	P31268
IntAct	P31268
	Polymorphism : SNP, mutations, diseases
OMIM	142950    [ map ]
GENETests	142950
SNP	HOXA7 [dbSNP-NCBI]
SNP	NM_006896 [SNP-NCI]
SNP	HOXA7 [GeneSNPs - Utah]  HOXA7] [HGBASE - SRS]
HAPMAP	HOXA7 [HAPMAP]
HGMD	HOXA7
Genetic Association	HOXA7
CDC HuGE	HOXA7
	General knowledge
Family Browser	HOXA7 [UCSC Family Browser]
SOURCE	NM_006896
SMD	Hs.660918
SAGE	Hs.660918
GO	negative regulation of transcription from RNA polymerase II promoter [Amigo]  negative regulation of transcription from RNA polymerase II promoter
GO	transcription factor activity [Amigo]  transcription factor activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	negative regulation of keratinocyte differentiation [Amigo]  negative regulation of keratinocyte differentiation
PubGene	HOXA7
TreeFam	HOXA7
CTD	3204 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	HOXA7 Related clones (RZPD - Berlin)
	PubMed
PubMed	23 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 16:50:33 2008