JAZF1 (JAZF zinc finger 1)

Identity

Other names	DKFZp761K2222
	TIP27
	ZNF802
HGNC	JAZF1
Location	7p15.2-p15.1
Location_base_pair	Starts at 27836718 and ends at 28186962 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

Breakpoints

External links

	Nomenclature
HGNC	JAZF1   28917
Entrez_Gene	JAZF1  221895  JAZF zinc finger 1
	Cards
GeneCards	JAZF1
Ensembl	ENSG00000153814 [Gene_View]  JAZF1 [Vega]
Genatlas	JAZF1
	Genomic and cartography
GoldenPath	JAZF1  -     chr7:27836718-28186962 -  7p15.2   [Description]    (hg18-March_2006)
Ensembl	JAZF1 - 7p15.2 [CytoView]
NCBI	Mapview
OMIM	606246 Disease map [OMIM]
HomoloGene	JAZF1
	Gene and transcription
Genbank	AK000711 [ ENTREZ ]
Genbank	AK091311 [ ENTREZ ]
Genbank	AL832491 [ ENTREZ ]
Genbank	AL834234 [ ENTREZ ]
Genbank	AY372319 [ ENTREZ ]
RefSeq	NM_175061 [ SRS ]    NM_175061 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
CCDS	JAZF1 CCDS - NCBI
AceView	JAZF1 AceView - NCBI
Unigene	Hs.368944 [ SRS ]    Hs.368944 [ NCBI ]
Fast-db	3289 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q69YN3 [ SRS]    Q69YN3 [ EXPASY ]     Q69YN3 [ INTERPRO ]     Q69YN3 [ UNIPROT ] Q69YN3 [ VarSplice FASTA ]
Prosite	PS00028 ZINC_FINGER_C2H2_1 [ SRS ]    PS00028 ZINC_FINGER_C2H2_1 [ Expasy ]
Interpro	IPR007087 Znf_C2H2 [ SRS ]    IPR007087 Znf_C2H2 [ EBI ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
CluSTr	Q69YN3
Smart	SM00355 ZnF_C2H2 [EMBL]
Blocks	Q69YN3
HPRD	09373
	Protein Interaction databases
DIP	Q69YN3
IntAct	Q69YN3
	Polymorphism : SNP, mutations, diseases
OMIM	606246    [ map ]
GENETests	606246
SNP	JAZF1 [dbSNP-NCBI]
SNP	NM_175061 [SNP-NCI]
SNP	JAZF1 [GeneSNPs - Utah]  JAZF1] [HGBASE - SRS]
HAPMAP	JAZF1 [HAPMAP]
COSMIC	JAZF1 [Somatic mutation (COSMIC-CGP-Sanger)]
TICdb	negative [Translocation breakpoints In Cancer]
HGMD	JAZF1
Genetic Association	JAZF1
CDC HuGE	JAZF1
	General knowledge
Family Browser	JAZF1 [UCSC Family Browser]
SOURCE	NM_175061
SMD	Hs.368944
SAGE	Hs.368944
GO	negative regulation of transcription from RNA polymerase II promoter [Amigo]  negative regulation of transcription from RNA polymerase II promoter
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	transcription corepressor activity [Amigo]  transcription corepressor activity
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	transcriptional repressor complex [Amigo]  transcriptional repressor complex
GO	metal ion binding [Amigo]  metal ion binding
PubGene	JAZF1
TreeFam	JAZF1
CTD	221895 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	JAZF1 Related clones (RZPD - Berlin)
	PubMed
PubMed	16 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 16:53:09 2008