Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNQ1OT1 (KCNQ1 overlapping transcript 1 (non-protein coding))

Identity

Other namesFLJ41078
KCNQ10T1
KvDMR1
KvLQT1-AS
LIT1
NCRNA00012
HGNC (Hugo) KCNQ1OT1
Location 11p15
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)KCNQ1OT1   6295
Entrez_Gene (NCBI)KCNQ1OT1  10984  KCNQ1 overlapping transcript 1 (non-protein coding)
Cards
GeneCards (Weizmann)KCNQ1OT1
Ensembl (Hinxton)ENSG00000118816 [Gene_View]  KCNQ1OT1 [Vega]
AceView (NCBI)KCNQ1OT1
Genatlas (Paris)KCNQ1OT1
euGene (Indiana)10984
SOURCE (Stanford)
Gene Expression (Array Express) ENSG00000118816
Genomic and cartography
GoldenPath (UCSC)KCNQ1OT1  -  11p15
EnsemblKCNQ1OT1 - [CytoView]
Mapping of homologs : NCBIKCNQ1OT1 [Mapview]
OMIM130650   604115   
Gene and transcription
Gene : Genbank (Entrez)AA155694 AF086011 AK123073
Reference sequence (RefSeq transcript) :SRS
Reference transcript : Entrez
RefSeq genomic : SRSAC_000054 AC_000143 NC_000011 NG_016178 NT_009237 NW_001838018 NW_924962
RefSeq genomic : EntrezAC_000054 AC_000143 NC_000011 NG_016178 NT_009237 NW_001838018 NW_924962
Consensus coding sequences : CCDS NCBIKCNQ1OT1
Cluster EST : UnigeneHs.604823 [ SRS ] Hs.604823 [ NCBI ]
Protein : pattern, domain, 3D structure
Domain families : Pfam SRS
Domain families : Pfam Sanger
Domain families : Pfam NCBI
Crystal structure of protein : PDB SRS
Crystal structure of protein : PDBSum
Crystal structure of protein : IMB
Crystal structure of protein : PDB RSDB
Protein Interaction databases
Polymorphism : SNP, mutations, diseases
Single Nucleotide Polymorphism (SNP) : dbSNP NCBIKCNQ1OT1
SNP : GeneSNP UtahKCNQ1OT1
SNP : HGBaseKCNQ1OT1
Genetic variants : HAPMAPKCNQ1OT1
Mutations and Diseases : HGMDKCNQ1OT1
Hereditary diseases : OMIM130650    604115   
Hereditary diseases : GENETests130650    604115   
Diseases : Genetic AssociationKCNQ1OT1
General knowledge
Homologs : HomoloGeneKCNQ1OT1
Homology/Alignments : Family Browser UCSCKCNQ1OT1
Phylogenetic Trees/Animal Genes : TreeFamKCNQ1OT1
Chemical/Protein Interactions : CTD10984
Keywords Ontology : AmiGO
Keywords Ontology : EGO-EBI
Pathways : BIOCARTA
Pathways : KEGG
Other databases
Probes
Probes : ImagenesKCNQ1OT1 Related clones (RZPD - Berlin)
Literature
PubMed26 Pubmed reference(s) in Entrez
PubGeneKCNQ1OT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2009Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 27 10:28:18 CET 2010

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