LMO1 (LIM domain only 1 (rhombotin 1))

Identity

Other names	MGC116692
	RBTN1
	RHOM1
	TTG1
HGNC	LMO1
Location	11p15
Location_base_pair	Starts at 8202433 and ends at 8241982 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LMO1   6641
Entrez_Gene	LMO1  4004  LIM domain only 1 (rhombotin 1)
	Cards
GeneCards	LMO1
Ensembl	LMO1 [Search_View]   ENSG00000166407 [Gene_View]
Genatlas	LMO1
GeneLynx	LMO1
eGenome	LMO1
euGene	4004
	Genomic and cartography
GoldenPath	LMO1  -  11p15   chr11:8202433-8241982 -  11p15.4   [Description]    (hg18-March_2006)
Ensembl	LMO1 - 11p15.4 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LMO1
	Gene and transcription
Genbank	BC039512 [ ENTREZ ]
Genbank	BC069673 [ ENTREZ ]
Genbank	BC069752 [ ENTREZ ]
Genbank	BC069793 [ ENTREZ ]
Genbank	BC096056 [ ENTREZ ]
RefSeq	NM_002315 [ SRS ]    NM_002315 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_009237 [ SRS ]    NT_009237 [ ENTREZ ]
RefSeq	NW_925006 [ SRS ]    NW_925006 [ ENTREZ ]
AceView	LMO1 AceView - NCBI
Unigene	Hs.654426 [ SRS ]    Hs.654426 [ NCBI ]     HS654426 [ spliceNest ]
Fast-db	2386 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P25800 [ SRS]    P25800 [ EXPASY ]     P25800 [ INTERPRO ]     P25800 [ UNIPROT ]
Prosite	PS00478 LIM_DOMAIN_1 [ SRS ]    PS00478 LIM_DOMAIN_1 [ Expasy ]
Prosite	PS50023 LIM_DOMAIN_2 [ SRS ]    PS50023 LIM_DOMAIN_2 [ Expasy ]
Interpro	IPR001781 Znf_LIM [ SRS ]    IPR001781 Znf_LIM [ EBI ]
CluSTr	P25800
Pfam	PF00412 LIM [ SRS ]    PF00412 LIM [ Sanger ]    pfam00412 [ NCBI-CDD ]
Smart	SM00132 LIM [EMBL]
Prodom	PD000094 LIM[INRA-Toulouse]
Prodom	P25800 RBTN1_HUMAN [ Domain structure ]   P25800 RBTN1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P25800
HPRD	01738
	Protein Interaction databases
DIP	P25800
IntAct	P25800
	Polymorphism : SNP, mutations, diseases
OMIM	186921    [ map ]
GENECLINICS	186921
SNP	LMO1 [dbSNP-NCBI]
SNP	NM_002315 [SNP-NCI]
SNP	LMO1 [GeneSNPs - Utah]  LMO1] [HGBASE - SRS]
HAPMAP	LMO1 [HAPMAP]
COSMIC	LMO1 [Somatic mutation (COSMIC-CGP-Sanger)]
TICdb	transcription [Translocation breakpoints In Cancer]
HGMD	LMO1
	General knowledge
Family Browser	LMO1 [UCSC Family Browser]
SOURCE	NM_002315
SMD	Hs.654426
SAGE	Hs.654426
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	zinc ion binding [Amigo]  zinc ion binding
GO	cell proliferation [Amigo]  cell proliferation
GO	metal ion binding [Amigo]  metal ion binding
PubGene	LMO1
TreeFam	LMO1
CTD	4004 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LMO1 Related clones (RZPD - Berlin)
	PubMed
PubMed	20 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:19:49 2008