LTBR (lymphotoxin beta receptor (TNFR superfamily, member 3))

Identity

Other names	CD18
	D12S370
	LT-BETA-R
	TNF-R-III
	TNFCR
	TNFR-RP
	TNFR2-RP
	TNFRSF3
HGNC	LTBR
Location	12p13
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	LTBR   6718
Entrez_Gene	LTBR  4055  lymphotoxin beta receptor (TNFR superfamily, member 3)
	Cards
GeneCards	LTBR
Ensembl	LTBR [Search_View]   ENSG00000111321 [Gene_View]
Genatlas	LTBR
GeneLynx	LTBR
eGenome	LTBR
euGene	4055
	Genomic and cartography
GoldenPath	LTBR  -  12p13   chr12:6363618-6370993 +  12p13.31   [Description]    (hg18-March_2006)
Ensembl	LTBR - 12p13.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	LTBR
	Gene and transcription
Genbank	AK027080 [ ENTREZ ]
Genbank	AK095418 [ ENTREZ ]
Genbank	BC026262 [ ENTREZ ]
Genbank	CR620746 [ ENTREZ ]
Genbank	CR626362 [ ENTREZ ]
RefSeq	NM_002342 [ SRS ]    NM_002342 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838050 [ SRS ]    NW_001838050 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	LTBR AceView - NCBI
Unigene	Hs.1116 [ SRS ]    Hs.1116 [ NCBI ]     HS1116 [ spliceNest ]
Fast-db	977 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P36941 [ SRS]    P36941 [ EXPASY ]     P36941 [ INTERPRO ]     P36941 [ UNIPROT ]
Prosite	PS00652 TNFR_NGFR_1 [ SRS ]    PS00652 TNFR_NGFR_1 [ Expasy ]
Prosite	PS50050 TNFR_NGFR_2 [ SRS ]    PS50050 TNFR_NGFR_2 [ Expasy ]
Interpro	IPR008063 Fas_rcpt [ SRS ]    IPR008063 Fas_rcpt [ EBI ]
Interpro	IPR017349 TNFR_3_LTBR [ SRS ]    IPR017349 TNFR_3_LTBR [ EBI ]
Interpro	IPR001368 TNFR_c6 [ SRS ]    IPR001368 TNFR_c6 [ EBI ]
CluSTr	P36941
Pfam	PF00020 TNFR_c6 [ SRS ]    PF00020 TNFR_c6 [ Sanger ]    pfam00020 [ NCBI-CDD ]
Smart	SM00208 TNFR [EMBL]
Blocks	P36941
PDB	1RF3 [ SRS ]    1RF3 [ PdbSum ],   1RF3 [ IMB ]   1RF3 [ RSDB ]
HPRD	02988
	Protein Interaction databases
DIP	P36941
IntAct	P36941
	Polymorphism : SNP, mutations, diseases
OMIM	600979    [ map ]
GENECLINICS	600979
SNP	LTBR [dbSNP-NCBI]
SNP	NM_002342 [SNP-NCI]
SNP	LTBR [GeneSNPs - Utah]  LTBR] [HGBASE - SRS]
HAPMAP	LTBR [HAPMAP]
COSMIC	LTBR [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	LTBR
	General knowledge
Family Browser	LTBR [UCSC Family Browser]
SOURCE	NM_002342
SMD	Hs.1116
SAGE	Hs.1116
GO	transmembrane receptor activity [Amigo]  transmembrane receptor activity
GO	protein binding [Amigo]  protein binding
GO	apoptosis [Amigo]  apoptosis
GO	immune response [Amigo]  immune response
GO	signal transduction [Amigo]  signal transduction
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	positive regulation of I-kappaB kinase/NF-kappaB cascade [Amigo]  positive regulation of I-kappaB kinase/NF-kappaB cascade
GO	interspecies interaction between organisms [Amigo]  interspecies interaction between organisms
BIOCARTA	Cells and Molecules involved in local acute inflammatory response    [Genes]
BIOCARTA	B Lymphocyte Cell Surface Molecules    [Genes]
BIOCARTA	CTL mediated immune response against target cells    [Genes]
BIOCARTA	Adhesion and Diapedesis of Granulocytes    [Genes]
BIOCARTA	Adhesion and Diapedesis of Lymphocytes    [Genes]
BIOCARTA	Adhesion Molecules on Lymphocyte    [Genes]
BIOCARTA	Monocyte and its Surface Molecules    [Genes]
BIOCARTA	Neutrophil and Its Surface Molecules    [Genes]
BIOCARTA	T Cytotoxic Cell Surface Molecules    [Genes]
BIOCARTA	T Helper Cell Surface Molecules    [Genes]
KEGG	Cytokine-cytokine receptor interaction
PubGene	LTBR
TreeFam	LTBR
CTD	4055 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	LTBR Related clones (RZPD - Berlin)
	PubMed
PubMed	38 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:18:40 2008