MALAT1 (metastasis associated lung adenocarcinoma transcript 1 (non-protein coding))

Identity

Other names	MALAT-1
	PRO2853
HGNC	MALAT1
Location	11q13.1
Location_base_pair	Starts at 65025123 and ends at 65027920 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	MALAT1   29665
Entrez_Gene	MALAT1  378938  metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)
	Cards
GeneCards	MALAT1
Ensembl	ENSG00000187566 [Gene_View]  MALAT1 [Vega]
Genatlas	MALAT1
	Genomic and cartography
GoldenPath	MALAT1  -  11q13.1   chr11:65025123-65027920 -  11q13.1   [Description]    (hg18-March_2006)
Ensembl	MALAT1 - 11q13.1 [CytoView]
NCBI	Mapview
OMIM	607924 Disease map [OMIM]
HomoloGene	MALAT1
	Gene and transcription
Genbank	AF001542 [ ENTREZ ]
Genbank	AJ535465 [ ENTREZ ]
Genbank	AK130345 [ ENTREZ ]
Genbank	AL050210 [ ENTREZ ]
Genbank	BC018448 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	AC_000143 [ SRS ]    AC_000143 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_033903 [ SRS ]    NT_033903 [ ENTREZ ]
RefSeq	NW_001838025 [ SRS ]    NW_001838025 [ ENTREZ ]
RefSeq	NW_925106 [ SRS ]    NW_925106 [ ENTREZ ]
CCDS	MALAT1 CCDS - NCBI
AceView	MALAT1 AceView - NCBI
Unigene	Hs.642877 [ SRS ]    Hs.642877 [ NCBI ]
	Protein : pattern, domain, 3D structure
SwissProt	Q9UHZ2 [ SRS]    Q9UHZ2 [ EXPASY ]     Q9UHZ2 [ INTERPRO ]     Q9UHZ2 [ UNIPROT ] Q9UHZ2 [ VarSplice FASTA ]
CluSTr	Q9UHZ2
Blocks	Q9UHZ2
	Protein Interaction databases
DIP	Q9UHZ2
IntAct	Q9UHZ2
	Polymorphism : SNP, mutations, diseases
OMIM	607924    [ map ]
GENETests	607924
SNP	MALAT1 [dbSNP-NCBI]
SNP	MALAT1 [GeneSNPs - Utah]  MALAT1] [HGBASE - SRS]
HAPMAP	MALAT1 [HAPMAP]
TICdb	- [Translocation breakpoints In Cancer]
HGMD	MALAT1
Genetic Association	MALAT1
CDC HuGE	MALAT1
	General knowledge
Family Browser	MALAT1 [UCSC Family Browser]
SMD	Hs.642877
SAGE	Hs.642877
PubGene	MALAT1
TreeFam	MALAT1
CTD	378938 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	MALAT1 Related clones (RZPD - Berlin)
	PubMed
PubMed	6 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 16:55:30 2008