NANOG (Nanog homeobox)

Identity

Other names	-
HGNC	NANOG
Location	12p13.31
Location_base_pair	Starts at 7833262 and ends at 7839922 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	NANOG   20857
Entrez_Gene	NANOG  79923  Nanog homeobox
	Cards
GeneCards	NANOG
Ensembl	NANOG [Search_View]   ENSG00000111704 [Gene_View]
Genatlas	NANOG
GeneLynx	NANOG
eGenome	NANOG
euGene	79923
	Genomic and cartography
GoldenPath	NANOG  -  12p13.31   chr12:7833262-7839922 +  12p13.31   [Description]    (hg18-March_2006)
Ensembl	NANOG - 12p13.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	NANOG
	Gene and transcription
Genbank	AB093576 [ ENTREZ ]
Genbank	AK022643 [ ENTREZ ]
Genbank	AK290896 [ ENTREZ ]
Genbank	AY230262 [ ENTREZ ]
Genbank	AY578089 [ ENTREZ ]
RefSeq	NM_024865 [ SRS ]    NM_024865 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009714 [ SRS ]    NT_009714 [ ENTREZ ]
RefSeq	NW_001838051 [ SRS ]    NW_001838051 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	NANOG AceView - NCBI
Unigene	Hs.661360 [ SRS ]    Hs.661360 [ NCBI ]     HS661360 [ spliceNest ]
Fast-db	1850 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9H9S0 [ SRS]    Q9H9S0 [ EXPASY ]     Q9H9S0 [ INTERPRO ]     Q9H9S0 [ UNIPROT ]
Prosite	PS00027 HOMEOBOX_1 [ SRS ]    PS00027 HOMEOBOX_1 [ Expasy ]
Prosite	PS50071 HOMEOBOX_2 [ SRS ]    PS50071 HOMEOBOX_2 [ Expasy ]
Interpro	IPR001356 Homeobox [ SRS ]    IPR001356 Homeobox [ EBI ]
CluSTr	Q9H9S0
Pfam	PF00046 Homeobox [ SRS ]    PF00046 Homeobox [ Sanger ]    pfam00046 [ NCBI-CDD ]
Smart	SM00389 HOX [EMBL]
Prodom	PD000010 Homeobox[INRA-Toulouse]
Prodom	Q9H9S0 NANOG_HUMAN [ Domain structure ]   Q9H9S0 NANOG_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9H9S0
HPRD	06397
	Protein Interaction databases
DIP	Q9H9S0
IntAct	Q9H9S0
	Polymorphism : SNP, mutations, diseases
OMIM	607937    [ map ]
GENECLINICS	607937
SNP	NANOG [dbSNP-NCBI]
SNP	NM_024865 [SNP-NCI]
SNP	NANOG [GeneSNPs - Utah]  NANOG] [HGBASE - SRS]
HAPMAP	NANOG [HAPMAP]
HGMD	NANOG
	General knowledge
Family Browser	NANOG [UCSC Family Browser]
SOURCE	NM_024865
SMD	Hs.661360
SAGE	Hs.661360
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	cell proliferation [Amigo]  cell proliferation
GO	embryonic development [Amigo]  embryonic development
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
GO	regulation of cell differentiation [Amigo]  regulation of cell differentiation
PubGene	NANOG
TreeFam	NANOG
CTD	79923 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	NANOG Related clones (RZPD - Berlin)
	PubMed
PubMed	29 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:22:44 2008