PAX7 (paired box 7)

Identity

Other names	HUP1
	PAX7B
HGNC	PAX7
Location	1p36.13
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PAX7   8621
Entrez_Gene	PAX7  5081  paired box 7
	Cards
GeneCards	PAX7
Ensembl	PAX7 [Search_View]   ENSG00000009709 [Gene_View]
Genatlas	PAX7
GeneLynx	PAX7
eGenome	PAX7
euGene	5081
	Genomic and cartography
GoldenPath	PAX7  -  1p36.13   chr1:18830087-18935219 +  1p36.13   [Description]    (hg18-March_2006)
Ensembl	PAX7 - 1p36.13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PAX7
	Gene and transcription
Genbank	BC121165 [ ENTREZ ]
Genbank	BC121166 [ ENTREZ ]
Genbank	DQ322591 [ ENTREZ ]
Genbank	X96743 [ ENTREZ ]
Genbank	Z35141 [ ENTREZ ]
RefSeq	NM_002584 [ SRS ]    NM_002584 [ ENTREZ ]
RefSeq	NM_013945 [ SRS ]    NM_013945 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004610 [ SRS ]    NT_004610 [ ENTREZ ]
RefSeq	NW_001838573 [ SRS ]    NW_001838573 [ ENTREZ ]
RefSeq	NW_927841 [ SRS ]    NW_927841 [ ENTREZ ]
AceView	PAX7 AceView - NCBI
Unigene	Hs.113253 [ SRS ]    Hs.113253 [ NCBI ]     HS113253 [ spliceNest ]
Fast-db	8103 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P23759 [ SRS]    P23759 [ EXPASY ]     P23759 [ INTERPRO ]     P23759 [ UNIPROT ]
Prosite	PS00027 HOMEOBOX_1 [ SRS ]    PS00027 HOMEOBOX_1 [ Expasy ]
Prosite	PS50071 HOMEOBOX_2 [ SRS ]    PS50071 HOMEOBOX_2 [ Expasy ]
Prosite	PS00034 PAIRED_1 [ SRS ]    PS00034 PAIRED_1 [ Expasy ]
Prosite	PS51057 PAIRED_2 [ SRS ]    PS51057 PAIRED_2 [ Expasy ]
Interpro	IPR001356 Homeobox [ SRS ]    IPR001356 Homeobox [ EBI ]
Interpro	IPR012287 Homeodomain-rel [ SRS ]    IPR012287 Homeodomain-rel [ EBI ]
Interpro	IPR001523 Paired_box_N [ SRS ]    IPR001523 Paired_box_N [ EBI ]
Interpro	IPR011991 Wing_hlx_DNA_bd [ SRS ]    IPR011991 Wing_hlx_DNA_bd [ EBI ]
CluSTr	P23759
Pfam	PF00046 Homeobox [ SRS ]    PF00046 Homeobox [ Sanger ]    pfam00046 [ NCBI-CDD ]
Pfam	PF00292 PAX [ SRS ]    PF00292 PAX [ Sanger ]    pfam00292 [ NCBI-CDD ]
Smart	SM00389 HOX [EMBL]
Smart	SM00351 PAX [EMBL]
Prodom	PD000010 Homeobox[INRA-Toulouse]
Prodom	P23759 PAX7_HUMAN [ Domain structure ]   P23759 PAX7_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P23759
HPRD	01331
	Protein Interaction databases
DIP	P23759
IntAct	P23759
	Polymorphism : SNP, mutations, diseases
OMIM	167410;268220    [ map ]
GENECLINICS	167410;268220
SNP	PAX7 [dbSNP-NCBI]
SNP	NM_002584 [SNP-NCI]
SNP	NM_013945 [SNP-NCI]
SNP	PAX7 [GeneSNPs - Utah]  PAX7] [HGBASE - SRS]
HAPMAP	PAX7 [HAPMAP]
COSMIC	PAX7 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PAX7
	General knowledge
Family Browser	PAX7 [UCSC Family Browser]
SOURCE	NM_002584
SOURCE	NM_013945
SMD	Hs.113253
SAGE	Hs.113253
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	anti-apoptosis [Amigo]  anti-apoptosis
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	anatomical structure morphogenesis [Amigo]  anatomical structure morphogenesis
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	PAX7
TreeFam	PAX7
CTD	5081 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PAX7 Related clones (RZPD - Berlin)
	PubMed
PubMed	24 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:23:47 2008