PCDH7 (protocadherin 7)

Identity

Other names	BH-Pcdh
	BHPCDH
Hugo	PCDH7
Location	4p15
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	PCDH7
GDB	PCDH7
Entrez_Gene	PCDH7  5099  protocadherin 7
	Cards
GeneCards	PCDH7
Ensembl	PCDH7 [Search_View]   ENSG00000169851 [Gene_View]
Genatlas	PCDH7
GeneLynx	PCDH7
eGenome	PCDH7
euGene	5099
	Genomic and cartography
GoldenPath	PCDH7  -  4p15   chr4:30331135-30336055 +  4p15.1   [Description]    (hg18-March_2006)
Ensembl	PCDH7 - 4p15.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PCDH7
	Gene and transcription
Genbank	AB006755 [ ENTREZ ]
Genbank	AB006756 [ ENTREZ ]
Genbank	AB006757 [ ENTREZ ]
Genbank	AI041228 [ ENTREZ ]
Genbank	BC020338 [ ENTREZ ]
RefSeq	NM_002589 [ SRS ]    NM_002589 [ ENTREZ ]
RefSeq	NM_032456 [ SRS ]    NM_032456 [ ENTREZ ]
RefSeq	NM_032457 [ SRS ]    NM_032457 [ ENTREZ ]
RefSeq	AC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeq	NC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeq	NT_006316 [ SRS ]    NT_006316 [ ENTREZ ]
RefSeq	NW_922073 [ SRS ]    NW_922073 [ ENTREZ ]
AceView	PCDH7 AceView - NCBI
Unigene	Hs.570785 [ SRS ]    Hs.570785 [ NCBI ]     HS570785 [ spliceNest ]
Fast-db	3247 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O60245 [ SRS]    O60245 [ EXPASY ]     O60245 [ INTERPRO ]
Prosite	PS00232 CADHERIN_1 [ SRS ]    PS00232 CADHERIN_1 [ Expasy ]
Prosite	PS50268 CADHERIN_2 [ SRS ]    PS50268 CADHERIN_2 [ Expasy ]
Interpro	IPR002126 Cadherin [ SRS ]    IPR002126 Cadherin [ EBI ]
Interpro	IPR013164 Cadherin_N [ SRS ]    IPR013164 Cadherin_N [ EBI ]
Interpro	IPR013585 Protocadherin [ SRS ]    IPR013585 Protocadherin [ EBI ]
CluSTr	O60245
Pfam	PF00028 Cadherin [ SRS ]    PF00028 Cadherin [ Sanger ]    pfam00028 [ NCBI-CDD ]
Pfam	PF08266 Cadherin_2 [ SRS ]    PF08266 Cadherin_2 [ Sanger ]    pfam08266 [ NCBI-CDD ]
Pfam	PF08374 Protocadherin [ SRS ]    PF08374 Protocadherin [ Sanger ]    pfam08374 [ NCBI-CDD ]
Smart	SM00112 CA [EMBL]
Blocks	O60245
HPRD	04288
	Protein Interaction databases
DIP	O60245
IntAct	O60245
	Polymorphism : SNP, mutations, diseases
OMIM	602988    [ map ]
GENECLINICS	602988
SNP	PCDH7 [dbSNP-NCBI]
SNP	NM_002589 [SNP-NCI]
SNP	NM_032456 [SNP-NCI]
SNP	NM_032457 [SNP-NCI]
SNP	PCDH7 [GeneSNPs - Utah]  PCDH7] [HGBASE - SRS]
HAPMAP	PCDH7 [HAPMAP]
COSMIC	PCDH7 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PCDH7
	General knowledge
Family Browser	PCDH7 [UCSC Family Browser]
SOURCE	NM_002589
SOURCE	NM_032456
SOURCE	NM_032457
SMD	Hs.570785
SAGE	Hs.570785
GO	calcium ion binding [Amigo]  calcium ion binding
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	homophilic cell adhesion [Amigo]  homophilic cell adhesion
PubGene	PCDH7
TreeFam	PCDH7
CTD	5099 [Comparative Genomics Database]
	Other databases
	Probes
Probe	PCDH7 Related clones (RZPD - Berlin)
	PubMed
PubMed	9 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:20:35 2008