PDCD1LG2 (programmed cell death 1 ligand 2)

Identity

Other names	B7DC
	Btdc
	CD273
	MGC142238
	MGC142240
	PD-L2
	PDCD1L2
	PDL2
	bA574F11.2
HGNC	PDCD1LG2
Location	9p24.2
Location_base_pair	Starts at 5500545 and ends at 5561282 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PDCD1LG2   18731
Entrez_Gene	PDCD1LG2  80380  programmed cell death 1 ligand 2
	Cards
GeneCards	PDCD1LG2
Ensembl	PDCD1LG2 [Search_View]   ENSG00000197646 [Gene_View]
Genatlas	PDCD1LG2
GeneLynx	PDCD1LG2
eGenome	PDCD1LG2
euGene	80380
	Genomic and cartography
GoldenPath	PDCD1LG2  -  9p24.2   chr9:5500545-5561282 +  9p24.1   [Description]    (hg18-March_2006)
Ensembl	PDCD1LG2 - 9p24.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PDCD1LG2
	Gene and transcription
Genbank	AF329193 [ ENTREZ ]
Genbank	AF344424 [ ENTREZ ]
Genbank	AK001872 [ ENTREZ ]
Genbank	AY254343 [ ENTREZ ]
Genbank	AY271901 [ ENTREZ ]
RefSeq	NM_025239 [ SRS ]    NM_025239 [ ENTREZ ]
RefSeq	AC_000052 [ SRS ]    AC_000052 [ ENTREZ ]
RefSeq	AC_000141 [ SRS ]    AC_000141 [ ENTREZ ]
RefSeq	NC_000009 [ SRS ]    NC_000009 [ ENTREZ ]
RefSeq	NT_008413 [ SRS ]    NT_008413 [ ENTREZ ]
RefSeq	NW_001839149 [ SRS ]    NW_001839149 [ ENTREZ ]
RefSeq	NW_924062 [ SRS ]    NW_924062 [ ENTREZ ]
AceView	PDCD1LG2 AceView - NCBI
Unigene	Hs.617872 [ SRS ]    Hs.617872 [ NCBI ]     HS617872 [ spliceNest ]
Fast-db	1817 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q2LC89 [ SRS]    Q2LC89 [ EXPASY ]     Q2LC89 [ INTERPRO ]     Q2LC89 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR013162 CD80_C2-set [ SRS ]    IPR013162 CD80_C2-set [ EBI ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
CluSTr	Q2LC89
Pfam	PF08205 C2-set_2 [ SRS ]    PF08205 C2-set_2 [ Sanger ]    pfam08205 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Blocks	Q2LC89
HPRD	16147
	Protein Interaction databases
DIP	Q2LC89
IntAct	Q2LC89
	Polymorphism : SNP, mutations, diseases
OMIM	605723    [ map ]
GENECLINICS	605723
SNP	PDCD1LG2 [dbSNP-NCBI]
SNP	NM_025239 [SNP-NCI]
SNP	PDCD1LG2 [GeneSNPs - Utah]  PDCD1LG2] [HGBASE - SRS]
HAPMAP	PDCD1LG2 [HAPMAP]
COSMIC	PDCD1LG2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PDCD1LG2
	General knowledge
Family Browser	PDCD1LG2 [UCSC Family Browser]
SOURCE	NM_025239
SMD	Hs.617872
SAGE	Hs.617872
GO	molecular_function [Amigo]  molecular_function
GO	receptor activity [Amigo]  receptor activity
GO	extracellular region [Amigo]  extracellular region
GO	plasma membrane [Amigo]  plasma membrane
GO	immune response [Amigo]  immune response
GO	endomembrane system [Amigo]  endomembrane system
GO	integral to membrane [Amigo]  integral to membrane
KEGG	Cell adhesion molecules (CAMs)
PubGene	PDCD1LG2
TreeFam	PDCD1LG2
CTD	80380 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PDCD1LG2 Related clones (RZPD - Berlin)
	PubMed
PubMed	24 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:46:54 2008