PDZD2 (PDZ domain containing 2)

Identity

Other names	AIPC
	KIAA0300
	PAPIN
	PDZK3
	PIN1
HGNC	PDZD2
Location	5p13.3
Location_base_pair	Starts at 31834788 and ends at 32146795 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PDZD2   18486
Entrez_Gene	PDZD2  23037  PDZ domain containing 2
	Cards
GeneCards	PDZD2
Ensembl	PDZD2 [Search_View]   ENSG00000133401 [Gene_View]
Genatlas	PDZD2
GeneLynx	PDZD2
eGenome	PDZD2
euGene	23037
	Genomic and cartography
GoldenPath	PDZD2  -  5p13.3   chr5:31834788-32146795 +  5p13.3   [Description]    (hg18-March_2006)
Ensembl	PDZD2 - 5p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PDZD2
	Gene and transcription
Genbank	AB002298 [ ENTREZ ]
Genbank	AF338650 [ ENTREZ ]
Genbank	AK021922 [ ENTREZ ]
Genbank	AK091490 [ ENTREZ ]
Genbank	AK128686 [ ENTREZ ]
RefSeq	NM_178140 [ SRS ]    NM_178140 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838929 [ SRS ]    NW_001838929 [ ENTREZ ]
RefSeq	NW_922562 [ SRS ]    NW_922562 [ ENTREZ ]
AceView	PDZD2 AceView - NCBI
Unigene	Hs.481819 [ SRS ]    Hs.481819 [ NCBI ]     HS481819 [ spliceNest ]
Fast-db	2115 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O15018 [ SRS]    O15018 [ EXPASY ]     O15018 [ INTERPRO ]     O15018 [ UNIPROT ]
Prosite	PS50106 PDZ [ SRS ]    PS50106 PDZ [ Expasy ]
Interpro	IPR001478 PDZ [ SRS ]    IPR001478 PDZ [ EBI ]
CluSTr	O15018
Pfam	PF00595 PDZ [ SRS ]    PF00595 PDZ [ Sanger ]    pfam00595 [ NCBI-CDD ]
Smart	SM00228 PDZ [EMBL]
Blocks	O15018
HPRD	10142
	Protein Interaction databases
DIP	O15018
IntAct	O15018
	Polymorphism : SNP, mutations, diseases
OMIM	610697    [ map ]
GENECLINICS	610697
SNP	PDZD2 [dbSNP-NCBI]
SNP	NM_178140 [SNP-NCI]
SNP	PDZD2 [GeneSNPs - Utah]  PDZD2] [HGBASE - SRS]
HAPMAP	PDZD2 [HAPMAP]
HGMD	PDZD2
	General knowledge
Family Browser	PDZD2 [UCSC Family Browser]
SOURCE	NM_178140
SMD	Hs.481819
SAGE	Hs.481819
GO	structural molecule activity [Amigo]  structural molecule activity
GO	protein binding [Amigo]  protein binding
GO	protein binding [Amigo]  protein binding
GO	extracellular region [Amigo]  extracellular region
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	intercellular junction [Amigo]  intercellular junction
GO	cell adhesion [Amigo]  cell adhesion
PubGene	PDZD2
TreeFam	PDZD2
CTD	23037 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PDZD2 Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:25:15 2008