PIGA (phosphatidylinositol glycan anchor biosynthesis, class A (paroxysmal nocturnal hemoglobinuria))

Identity

Other names	GPI3
	PIG-A
Hugo	PIGA
Location	Xp22.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	PIGA
GDB	PIGA
Entrez_Gene	PIGA  5277  phosphatidylinositol glycan anchor biosynthesis, class A (paroxysmal nocturnal hemoglobinuria)
	Cards
GeneCards	PIGA
Ensembl	PIGA [Search_View]   ENSG00000165195 [Gene_View]
Genatlas	PIGA
GeneLynx	PIGA
eGenome	PIGA
euGene	5277
	Genomic and cartography
GoldenPath	PIGA  -  Xp22.1   chrX:15247501-15263581 -  Xp22.2   [Description]    (hg18-March_2006)
Ensembl	PIGA - Xp22.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PIGA
	Gene and transcription
Genbank	AK098047 [ ENTREZ ]
Genbank	BC038236 [ ENTREZ ]
Genbank	BM998465 [ ENTREZ ]
Genbank	D11466 [ ENTREZ ]
Genbank	DA951065 [ ENTREZ ]
RefSeq	NM_002641 [ SRS ]    NM_002641 [ ENTREZ ]
RefSeq	NM_020473 [ SRS ]    NM_020473 [ ENTREZ ]
RefSeq	AC_000066 [ SRS ]    AC_000066 [ ENTREZ ]
RefSeq	NC_000023 [ SRS ]    NC_000023 [ ENTREZ ]
RefSeq	NT_011757 [ SRS ]    NT_011757 [ ENTREZ ]
RefSeq	NW_927700 [ SRS ]    NW_927700 [ ENTREZ ]
AceView	PIGA AceView - NCBI
Unigene	Hs.137154 [ SRS ]    Hs.137154 [ NCBI ]     HS137154 [ spliceNest ]
Fast-db	2236 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P37287 [ SRS]    P37287 [ EXPASY ]     P37287 [ INTERPRO ]
Interpro	IPR001296 Glyco_trans_1 [ SRS ]    IPR001296 Glyco_trans_1 [ EBI ]
Interpro	IPR013234 PIGA_GPI_anchor [ SRS ]    IPR013234 PIGA_GPI_anchor [ EBI ]
CluSTr	P37287
Pfam	PF00534 Glycos_transf_1 [ SRS ]    PF00534 Glycos_transf_1 [ Sanger ]    pfam00534 [ NCBI-CDD ]
Pfam	PF08288 PIGA [ SRS ]    PF08288 PIGA [ Sanger ]    pfam08288 [ NCBI-CDD ]
Blocks	P37287
HPRD	02410
	Protein Interaction databases
DIP	P37287
IntAct	P37287
	Polymorphism : SNP, mutations, diseases
OMIM	311770    [ map ]
GENECLINICS	311770
SNP	PIGA [dbSNP-NCBI]
SNP	NM_002641 [SNP-NCI]
SNP	NM_020473 [SNP-NCI]
SNP	PIGA [GeneSNPs - Utah]  PIGA] [HGBASE - SRS]
HAPMAP	PIGA [HAPMAP]
COSMIC	PIGA [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PIGA
	General knowledge
Family Browser	PIGA [UCSC Family Browser]
SOURCE	NM_002641
SOURCE	NM_020473
SMD	Hs.137154
SAGE	Hs.137154
Enzyme	2.4.1.198 [ Enzyme-SRS ]   2.4.1.198 [ Brenda-SRS ]   2.4.1.198 [ KEGG ]   2.4.1.198 [ WIT ]
GO	glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex [Amigo]  glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex
GO	protein binding [Amigo]  protein binding
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	endoplasmic reticulum membrane [Amigo]  endoplasmic reticulum membrane
GO	GPI anchor biosynthetic process [Amigo]  GPI anchor biosynthetic process
GO	biosynthetic process [Amigo]  biosynthetic process
GO	positive regulation of metabolic process [Amigo]  positive regulation of metabolic process
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	transferase activity, transferring glycosyl groups [Amigo]  transferase activity, transferring glycosyl groups
GO	phosphatidylinositol N-acetylglucosaminyltransferase activity [Amigo]  phosphatidylinositol N-acetylglucosaminyltransferase activity
KEGG	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis
KEGG	Glycan structures - biosynthesis 2
PubGene	PIGA
TreeFam	PIGA
CTD	5277 [Comparative Genomics Database]
	Other databases
	Probes
Probe	PIGA Related clones (RZPD - Berlin)
	PubMed
PubMed	24 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:21:26 2008