PKMYT1 (protein kinase, membrane associated tyrosine/threonine 1)

Identity

Other names	DKFZp547K1610
	FLJ20093
	MYT1
HGNC	PKMYT1
Location	16p13.3
Location_base_pair	Starts at 2962793 and ends at 2970475 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PKMYT1   29650
Entrez_Gene	PKMYT1  9088  protein kinase, membrane associated tyrosine/threonine 1
	Cards
GeneCards	PKMYT1
Ensembl	PKMYT1 [Search_View]   ENSG00000127564 [Gene_View]
Genatlas	PKMYT1
GeneLynx	PKMYT1
eGenome	PKMYT1
euGene	9088
	Genomic and cartography
GoldenPath	PKMYT1  -  16p13.3   chr16:2962793-2970475 -  16p13.3   [Description]    (hg18-March_2006)
Ensembl	PKMYT1 - 16p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PKMYT1
	Gene and transcription
Genbank	AK097642 [ ENTREZ ]
Genbank	AK098452 [ ENTREZ ]
Genbank	AK309964 [ ENTREZ ]
Genbank	BC121161 [ ENTREZ ]
Genbank	BC121162 [ ENTREZ ]
RefSeq	NM_004203 [ SRS ]    NM_004203 [ ENTREZ ]
RefSeq	NM_182687 [ SRS ]    NM_182687 [ ENTREZ ]
RefSeq	AC_000059 [ SRS ]    AC_000059 [ ENTREZ ]
RefSeq	AC_000148 [ SRS ]    AC_000148 [ ENTREZ ]
RefSeq	NC_000016 [ SRS ]    NC_000016 [ ENTREZ ]
RefSeq	NT_037887 [ SRS ]    NT_037887 [ ENTREZ ]
RefSeq	NW_001838341 [ SRS ]    NW_001838341 [ ENTREZ ]
RefSeq	NW_926018 [ SRS ]    NW_926018 [ ENTREZ ]
AceView	PKMYT1 AceView - NCBI
Unigene	Hs.77783 [ SRS ]    Hs.77783 [ NCBI ]     HS77783 [ spliceNest ]
Fast-db	2525 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q0IJ49 [ SRS]    Q0IJ49 [ EXPASY ]     Q0IJ49 [ INTERPRO ]     Q0IJ49 [ UNIPROT ]
Prosite	PS00107 PROTEIN_KINASE_ATP [ SRS ]    PS00107 PROTEIN_KINASE_ATP [ Expasy ]
Prosite	PS50011 PROTEIN_KINASE_DOM [ SRS ]    PS50011 PROTEIN_KINASE_DOM [ Expasy ]
Prosite	PS00108 PROTEIN_KINASE_ST [ SRS ]    PS00108 PROTEIN_KINASE_ST [ Expasy ]
Interpro	IPR000719 Prot_kinase_core [ SRS ]    IPR000719 Prot_kinase_core [ EBI ]
Interpro	IPR017441 Protein_kinase_ATP_bd_CS [ SRS ]    IPR017441 Protein_kinase_ATP_bd_CS [ EBI ]
Interpro	IPR017442 Se/Thr_pkinase-rel [ SRS ]    IPR017442 Se/Thr_pkinase-rel [ EBI ]
Interpro	IPR008271 Ser_thr_pkin_AS [ SRS ]    IPR008271 Ser_thr_pkin_AS [ EBI ]
CluSTr	Q0IJ49
Pfam	PF00069 Pkinase [ SRS ]    PF00069 Pkinase [ Sanger ]    pfam00069 [ NCBI-CDD ]
Prodom	PD000001 Prot_kinase[INRA-Toulouse]
Prodom	Q0IJ49 Q0IJ49_HUMAN [ Domain structure ]   Q0IJ49 Q0IJ49_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q0IJ49
HPRD	03920
	Protein Interaction databases
DIP	Q0IJ49
IntAct	Q0IJ49
	Polymorphism : SNP, mutations, diseases
OMIM	602474    [ map ]
GENECLINICS	602474
SNP	PKMYT1 [dbSNP-NCBI]
SNP	NM_004203 [SNP-NCI]
SNP	NM_182687 [SNP-NCI]
SNP	PKMYT1 [GeneSNPs - Utah]  PKMYT1] [HGBASE - SRS]
HAPMAP	PKMYT1 [HAPMAP]
COSMIC	PKMYT1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	PKMYT1
	General knowledge
Family Browser	PKMYT1 [UCSC Family Browser]
SOURCE	NM_004203
SOURCE	NM_182687
SMD	Hs.77783
SAGE	Hs.77783
GO	regulation of cyclin-dependent protein kinase activity [Amigo]  regulation of cyclin-dependent protein kinase activity
GO	Golgi membrane [Amigo]  Golgi membrane
GO	nucleotide binding [Amigo]  nucleotide binding
GO	protein serine/threonine kinase activity [Amigo]  protein serine/threonine kinase activity
GO	protein binding [Amigo]  protein binding
GO	ATP binding [Amigo]  ATP binding
GO	membrane fraction [Amigo]  membrane fraction
GO	nucleoplasm [Amigo]  nucleoplasm
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	endoplasmic reticulum membrane [Amigo]  endoplasmic reticulum membrane
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	protein amino acid phosphorylation [Amigo]  protein amino acid phosphorylation
GO	cell cycle [Amigo]  cell cycle
GO	regulation of mitosis [Amigo]  regulation of mitosis
GO	membrane [Amigo]  membrane
GO	transferase activity [Amigo]  transferase activity
KEGG	Cell cycle
PubGene	PKMYT1
TreeFam	PKMYT1
CTD	9088 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PKMYT1 Related clones (RZPD - Berlin)
	PubMed
PubMed	17 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:25:59 2008