POLS (polymerase (DNA directed) sigma)

Identity

Other names	LAK-1
	POLK
	TRF4
	TRF4-1
HGNC	POLS
Location	5p15
Location_base_pair	Starts at 6767718 and ends at 6810161 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	POLS   16705
Entrez_Gene	POLS  11044  polymerase (DNA directed) sigma
	Cards
GeneCards	POLS
Ensembl	ENSG00000112941 [Gene_View]  POLS [Vega]
Genatlas	POLS
	Genomic and cartography
GoldenPath	POLS  -  5p15   chr5:6767718-6810161 +  5p15.31   [Description]    (hg18-March_2006)
Ensembl	POLS - 5p15.31 [CytoView]
NCBI	Mapview
OMIM	605198 Disease map [OMIM]
HomoloGene	POLS
	Gene and transcription
Genbank	AB005754 [ ENTREZ ]
Genbank	AF089896 [ ENTREZ ]
Genbank	AI871781 [ ENTREZ ]
Genbank	AK289857 [ ENTREZ ]
Genbank	AK308405 [ ENTREZ ]
RefSeq	NM_006999 [ SRS ]    NM_006999 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838926 [ SRS ]    NW_001838926 [ ENTREZ ]
RefSeq	NW_922518 [ SRS ]    NW_922518 [ ENTREZ ]
CCDS	POLS CCDS - NCBI
AceView	POLS AceView - NCBI
Unigene	Hs.481542 [ SRS ]    Hs.481542 [ NCBI ]
Fast-db	1256 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5XG87 [ SRS]    Q5XG87 [ EXPASY ]     Q5XG87 [ INTERPRO ]     Q5XG87 [ UNIPROT ] Q5XG87 [ VarSplice FASTA ]
Interpro	IPR002934 Nucleotidyltransferase [ SRS ]    IPR002934 Nucleotidyltransferase [ EBI ]
Interpro	IPR002058 PAP_assoc [ SRS ]    IPR002058 PAP_assoc [ EBI ]
CluSTr	Q5XG87
Pfam	PF01909 NTP_transf_2 [ SRS ]    PF01909 NTP_transf_2 [ Sanger ]    pfam01909 [ NCBI-CDD ]
Pfam	PF03828 PAP_assoc [ SRS ]    PF03828 PAP_assoc [ Sanger ]    pfam03828 [ NCBI-CDD ]
Blocks	Q5XG87
HPRD	09239
	Protein Interaction databases
DIP	Q5XG87
IntAct	Q5XG87
	Polymorphism : SNP, mutations, diseases
OMIM	605198    [ map ]
GENETests	605198
SNP	POLS [dbSNP-NCBI]
SNP	NM_006999 [SNP-NCI]
SNP	POLS [GeneSNPs - Utah]  POLS] [HGBASE - SRS]
HAPMAP	POLS [HAPMAP]
HGMD	POLS
Genetic Association	POLS
CDC HuGE	POLS
	General knowledge
Family Browser	POLS [UCSC Family Browser]
SOURCE	NM_006999
SMD	Hs.481542
SAGE	Hs.481542
Enzyme	2.7.7.7 [ Enzyme-Expasy ]   2.7.7.7 [ Enzyme-SRS ]   2.7.7.7 [ IntEnz-EBI ]   2.7.7.7 [ BRENDA ]   2.7.7.7 [ KEGG ]
GO	DNA binding [Amigo]  DNA binding
GO	DNA-directed DNA polymerase activity [Amigo]  DNA-directed DNA polymerase activity
GO	nucleus [Amigo]  nucleus
GO	DNA replication [Amigo]  DNA replication
GO	double-strand break repair [Amigo]  double-strand break repair
GO	cell cycle [Amigo]  cell cycle
GO	sister chromatid cohesion [Amigo]  sister chromatid cohesion
GO	mitosis [Amigo]  mitosis
GO	mitotic chromosome condensation [Amigo]  mitotic chromosome condensation
GO	transferase activity [Amigo]  transferase activity
GO	nucleotidyltransferase activity [Amigo]  nucleotidyltransferase activity
GO	response to drug [Amigo]  response to drug
GO	SMC protein binding [Amigo]  SMC protein binding
GO	cell division [Amigo]  cell division
KEGG	DNA polymerase
PubGene	POLS
TreeFam	POLS
CTD	11044 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	POLS Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:02:14 2008