PYGB (phosphorylase, glycogen; brain)

Identity

Other names	MGC9213
HGNC	PYGB
Location	20
Location_base_pair	Starts at 25176706 and ends at 25226648 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	PYGB   9723
Entrez_Gene	PYGB  5834  phosphorylase, glycogen; brain
	Cards
GeneCards	PYGB
Ensembl	PYGB [Search_View]   ENSG00000100994 [Gene_View]
Genatlas	PYGB
GeneLynx	PYGB
eGenome	PYGB
euGene	5834
	Genomic and cartography
GoldenPath	PYGB  -  20   chr20:25176706-25226648 +  20p11.21   [Description]    (hg18-March_2006)
Ensembl	PYGB - 20p11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	PYGB
	Gene and transcription
Genbank	AB209080 [ ENTREZ ]
Genbank	AF432222 [ ENTREZ ]
Genbank	AK299697 [ ENTREZ ]
Genbank	AK309036 [ ENTREZ ]
Genbank	BC017045 [ ENTREZ ]
RefSeq	NM_002862 [ SRS ]    NM_002862 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838659 [ SRS ]    NW_001838659 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	PYGB AceView - NCBI
Unigene	Hs.368157 [ SRS ]    Hs.368157 [ NCBI ]     HS368157 [ spliceNest ]
Fast-db	7238 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P11216 [ SRS]    P11216 [ EXPASY ]     P11216 [ INTERPRO ]     P11216 [ UNIPROT ]
Prosite	PS00102 PHOSPHORYLASE [ SRS ]    PS00102 PHOSPHORYLASE [ Expasy ]
Interpro	IPR011833 Glycg_phsphrylas [ SRS ]    IPR011833 Glycg_phsphrylas [ EBI ]
Interpro	IPR000811 Glyco_trans_35 [ SRS ]    IPR000811 Glyco_trans_35 [ EBI ]
CluSTr	P11216
Pfam	PF00343 Phosphorylase [ SRS ]    PF00343 Phosphorylase [ Sanger ]    pfam00343 [ NCBI-CDD ]
Blocks	P11216
HPRD	00720
	Protein Interaction databases
DIP	P11216
IntAct	P11216
	Polymorphism : SNP, mutations, diseases
OMIM	138550    [ map ]
GENECLINICS	138550
SNP	PYGB [dbSNP-NCBI]
SNP	NM_002862 [SNP-NCI]
SNP	PYGB [GeneSNPs - Utah]  PYGB] [HGBASE - SRS]
HAPMAP	PYGB [HAPMAP]
HGMD	PYGB
	General knowledge
Family Browser	PYGB [UCSC Family Browser]
SOURCE	NM_002862
SMD	Hs.368157
SAGE	Hs.368157
GO	phosphorylase activity [Amigo]  phosphorylase activity
GO	cytoplasm [Amigo]  cytoplasm
GO	carbohydrate metabolic process [Amigo]  carbohydrate metabolic process
GO	glycogen catabolic process [Amigo]  glycogen catabolic process
GO	glycogen phosphorylase activity [Amigo]  glycogen phosphorylase activity
GO	transferase activity, transferring glycosyl groups [Amigo]  transferase activity, transferring glycosyl groups
GO	pyridoxal phosphate binding [Amigo]  pyridoxal phosphate binding
KEGG	Starch and sucrose metabolism
KEGG	Insulin signaling pathway
PubGene	PYGB
TreeFam	PYGB
CTD	5834 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	PYGB Related clones (RZPD - Berlin)
	PubMed
PubMed	15 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:28:26 2008