RBAK (RB-associated KRAB zinc finger)

Identity

Other names	ZNF769
HGNC	RBAK
Location	7p22.1
Location_base_pair	Starts at 5052079 and ends at 5075645 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RBAK   17680
Entrez_Gene	RBAK  57786  RB-associated KRAB zinc finger
	Cards
GeneCards	RBAK
Ensembl	ENSG00000146587 [Gene_View]  RBAK [Vega]
Genatlas	RBAK
	Genomic and cartography
GoldenPath	RBAK  -  7p22.1   chr7:5052079-5075645 +  7p22.1   [Description]    (hg18-March_2006)
Ensembl	RBAK - 7p22.1 [CytoView]
NCBI	Mapview
OMIM	608191 Disease map [OMIM]
HomoloGene	RBAK
	Gene and transcription
Genbank	AK093275 [ ENTREZ ]
Genbank	AK293069 [ ENTREZ ]
Genbank	AL711327 [ ENTREZ ]
Genbank	BC136676 [ ENTREZ ]
Genbank	CD238907 [ ENTREZ ]
RefSeq	NM_021163 [ SRS ]    NM_021163 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001838998 [ SRS ]    NW_001838998 [ ENTREZ ]
RefSeq	NW_923206 [ SRS ]    NW_923206 [ ENTREZ ]
CCDS	RBAK CCDS - NCBI
AceView	RBAK AceView - NCBI
Unigene	Hs.396178 [ SRS ]    Hs.396178 [ NCBI ]
	Protein : pattern, domain, 3D structure
SwissProt	Q9NYW8 [ SRS]    Q9NYW8 [ EXPASY ]     Q9NYW8 [ INTERPRO ]     Q9NYW8 [ UNIPROT ] Q9NYW8 [ VarSplice FASTA ]
Prosite	PS50805 KRAB [ SRS ]    PS50805 KRAB [ Expasy ]
Prosite	PS00028 ZINC_FINGER_C2H2_1 [ SRS ]    PS00028 ZINC_FINGER_C2H2_1 [ Expasy ]
Prosite	PS50157 ZINC_FINGER_C2H2_2 [ SRS ]    PS50157 ZINC_FINGER_C2H2_2 [ Expasy ]
Interpro	IPR001909 Krueppel-associated_box [ SRS ]    IPR001909 Krueppel-associated_box [ EBI ]
Interpro	IPR007087 Znf_C2H2 [ SRS ]    IPR007087 Znf_C2H2 [ EBI ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR013087 Znf_C2H2/integrase_DNA-bd [ SRS ]    IPR013087 Znf_C2H2/integrase_DNA-bd [ EBI ]
Interpro	IPR007086 Znf_C2H2_sub [ SRS ]    IPR007086 Znf_C2H2_sub [ EBI ]
CluSTr	Q9NYW8
Pfam	PF01352 KRAB [ SRS ]    PF01352 KRAB [ Sanger ]    pfam01352 [ NCBI-CDD ]
Pfam	PF00096 zf-C2H2 [ SRS ]    PF00096 zf-C2H2 [ Sanger ]    pfam00096 [ NCBI-CDD ]
Smart	SM00349 KRAB [EMBL]
Smart	SM00355 ZnF_C2H2 [EMBL]
Prodom	PD000003 Znf_C2H2[INRA-Toulouse]
Prodom	Q9NYW8 RBAK_HUMAN [ Domain structure ]   Q9NYW8 RBAK_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9NYW8
HPRD	16296
	Protein Interaction databases
DIP	Q9NYW8
IntAct	Q9NYW8
	Polymorphism : SNP, mutations, diseases
OMIM	608191    [ map ]
GENETests	608191
SNP	RBAK [dbSNP-NCBI]
SNP	NM_021163 [SNP-NCI]
SNP	RBAK [GeneSNPs - Utah]  RBAK] [HGBASE - SRS]
HAPMAP	RBAK [HAPMAP]
COSMIC	RBAK [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RBAK
Genetic Association	RBAK
CDC HuGE	RBAK
	General knowledge
Family Browser	RBAK [UCSC Family Browser]
SOURCE	NM_021163
SMD	Hs.396178
SAGE	Hs.396178
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	zinc ion binding [Amigo]  zinc ion binding
GO	transcription repressor activity [Amigo]  transcription repressor activity
GO	metal ion binding [Amigo]  metal ion binding
PubGene	RBAK
TreeFam	RBAK
CTD	57786 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RBAK Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:05:18 2008