RBPJ (recombination signal binding protein for immunoglobulin kappa J region)

Identity

Other names	CBF1
	IGKJRB
	IGKJRB1
	KBF2
	MGC61669
	RBP-J
	RBPJK
	RBPSUH
	SUH
	csl
Hugo	RBPSUH
Location	4p15.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
Hugo	RBPSUH
GDB	RBPJ
Entrez_Gene	RBPJ  3516  recombination signal binding protein for immunoglobulin kappa J region
	Cards
GeneCards	RBPJ
Ensembl	RBPJ [Search_View]   ENSG00000168214 [Gene_View]
Genatlas	RBPJ
GeneLynx	RBPJ
eGenome	RBPJ
euGene	3516
	Genomic and cartography
GoldenPath	RBPJ  -  4p15.2   chr4:25931546-26042376 +  4p15.2   [Description]    (hg18-March_2006)
Ensembl	RBPJ - 4p15.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	RBPJ
	Gene and transcription
Genbank	AK056944 [ ENTREZ ]
Genbank	AK126357 [ ENTREZ ]
Genbank	AL600045 [ ENTREZ ]
Genbank	BC020780 [ ENTREZ ]
Genbank	BC053531 [ ENTREZ ]
RefSeq	NM_005349 [ SRS ]    NM_005349 [ ENTREZ ]
RefSeq	NM_015874 [ SRS ]    NM_015874 [ ENTREZ ]
RefSeq	NM_203283 [ SRS ]    NM_203283 [ ENTREZ ]
RefSeq	NM_203284 [ SRS ]    NM_203284 [ ENTREZ ]
RefSeq	AC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeq	NC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeq	NT_006316 [ SRS ]    NT_006316 [ ENTREZ ]
RefSeq	NW_922073 [ SRS ]    NW_922073 [ ENTREZ ]
AceView	RBPJ AceView - NCBI
Unigene	Hs.479396 [ SRS ]    Hs.479396 [ NCBI ]     HS479396 [ spliceNest ]
Fast-db	3172 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q06330 [ SRS]    Q06330 [ EXPASY ]     Q06330 [ INTERPRO ]
Interpro	IPR015350 Beta-trefoil [ SRS ]    IPR015350 Beta-trefoil [ EBI ]
Interpro	IPR002909 IPT_TIG_rcpt [ SRS ]    IPR002909 IPT_TIG_rcpt [ EBI ]
Interpro	IPR015351 LAG1_DNA_bd [ SRS ]    IPR015351 LAG1_DNA_bd [ EBI ]
CluSTr	Q06330
Pfam	PF09270 Beta-trefoil [ SRS ]    PF09270 Beta-trefoil [ Sanger ]    pfam09270 [ NCBI-CDD ]
Pfam	PF09271 LAG1-DNAbind [ SRS ]    PF09271 LAG1-DNAbind [ Sanger ]    pfam09271 [ NCBI-CDD ]
Pfam	PF01833 TIG [ SRS ]    PF01833 TIG [ Sanger ]    pfam01833 [ NCBI-CDD ]
Blocks	Q06330
PDB	2F8X [ SRS ]    2F8X [ PdbSum ],   2F8X [ IMB ]   2F8X [ RSDB ]
HPRD	00920
	Protein Interaction databases
DIP	Q06330
IntAct	Q06330
	Polymorphism : SNP, mutations, diseases
OMIM	147183    [ map ]
GENECLINICS	147183
SNP	RBPJ [dbSNP-NCBI]
SNP	NM_005349 [SNP-NCI]
SNP	NM_015874 [SNP-NCI]
SNP	NM_203283 [SNP-NCI]
SNP	NM_203284 [SNP-NCI]
SNP	RBPJ [GeneSNPs - Utah]  RBPJ] [HGBASE - SRS]
HAPMAP	RBPJ [HAPMAP]
COSMIC	RBPJ [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RBPSUH
	General knowledge
Family Browser	RBPJ [UCSC Family Browser]
SOURCE	NM_005349
SOURCE	NM_015874
SOURCE	NM_203283
SOURCE	NM_203284
SMD	Hs.479396
SAGE	Hs.479396
GO	recombinase activity [Amigo]  recombinase activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription factor activity [Amigo]  transcription factor activity
GO	RNA polymerase II transcription factor activity [Amigo]  RNA polymerase II transcription factor activity
GO	protein binding [Amigo]  protein binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	nucleus [Amigo]  nucleus
GO	nucleolus [Amigo]  nucleolus
GO	DNA recombination [Amigo]  DNA recombination
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	transcription from RNA polymerase II promoter [Amigo]  transcription from RNA polymerase II promoter
GO	Notch signaling pathway [Amigo]  Notch signaling pathway
GO	regulation of transcription [Amigo]  regulation of transcription
GO	negative regulation of transcription, DNA-dependent [Amigo]  negative regulation of transcription, DNA-dependent
KEGG	Notch signaling pathway
PubGene	RBPJ
TreeFam	RBPSUH
CTD	3516 [Comparative Genomics Database]
	Other databases
	Probes
Probe	RBPSUH Related clones (RZPD - Berlin)
	PubMed
PubMed	47 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:25:41 2008