RIOK1 (RIO kinase 1 (yeast))

Identity

Other names	AD034
	FLJ30006
	MGC12903
	bA288G3.1
HGNC	RIOK1
Location	6p24.3
Location_base_pair	Starts at 7335061 and ends at 7363269 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RIOK1   18656
Entrez_Gene	RIOK1  83732  RIO kinase 1 (yeast)
	Cards
GeneCards	RIOK1
Ensembl	RIOK1 [Search_View]   ENSG00000124784 [Gene_View]
Genatlas	RIOK1
GeneLynx	RIOK1
eGenome	RIOK1
euGene	83732
	Genomic and cartography
GoldenPath	RIOK1  -  6p24.3   chr6:7335061-7363269 +  6p24.3   [Description]    (hg18-March_2006)
Ensembl	RIOK1 - 6p24.3 [CytoView]
NCBI	Mapview
HomoloGene	RIOK1
	Gene and transcription
Genbank	AF258661 [ ENTREZ ]
Genbank	AK054568 [ ENTREZ ]
Genbank	AK314467 [ ENTREZ ]
Genbank	AL834277 [ ENTREZ ]
Genbank	AY094356 [ ENTREZ ]
RefSeq	NM_031480 [ SRS ]    NM_031480 [ ENTREZ ]
RefSeq	NM_153005 [ SRS ]    NM_153005 [ ENTREZ ]
RefSeq	AC_000049 [ SRS ]    AC_000049 [ ENTREZ ]
RefSeq	AC_000138 [ SRS ]    AC_000138 [ ENTREZ ]
RefSeq	NC_000006 [ SRS ]    NC_000006 [ ENTREZ ]
RefSeq	NT_034880 [ SRS ]    NT_034880 [ ENTREZ ]
RefSeq	NW_001838973 [ SRS ]    NW_001838973 [ ENTREZ ]
RefSeq	NW_922984 [ SRS ]    NW_922984 [ ENTREZ ]
AceView	RIOK1 AceView - NCBI
Unigene	Hs.591353 [ SRS ]    Hs.591353 [ NCBI ]     HS591353 [ spliceNest ]
Fast-db	1941 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5W0K5 [ SRS]    Q5W0K5 [ EXPASY ]     Q5W0K5 [ INTERPRO ]     Q5W0K5 [ UNIPROT ]
Prosite	PS01245 RIO1 [ SRS ]    PS01245 RIO1 [ Expasy ]
Interpro	IPR000687 RIO_kinase [ SRS ]    IPR000687 RIO_kinase [ EBI ]
Interpro	IPR017407 Ser/Thr_prot_kinase_Rio1 [ SRS ]    IPR017407 Ser/Thr_prot_kinase_Rio1 [ EBI ]
CluSTr	Q5W0K5
Pfam	PF01163 RIO1 [ SRS ]    PF01163 RIO1 [ Sanger ]    pfam01163 [ NCBI-CDD ]
Smart	SM00090 RIO [EMBL]
Blocks	Q5W0K5
HPRD	17978
	Protein Interaction databases
DIP	Q5W0K5
IntAct	Q5W0K5
	Polymorphism : SNP, mutations, diseases
SNP	RIOK1 [dbSNP-NCBI]
SNP	NM_031480 [SNP-NCI]
SNP	NM_153005 [SNP-NCI]
SNP	RIOK1 [GeneSNPs - Utah]  RIOK1] [HGBASE - SRS]
HAPMAP	RIOK1 [HAPMAP]
COSMIC	RIOK1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RIOK1
	General knowledge
Family Browser	RIOK1 [UCSC Family Browser]
SOURCE	NM_031480
SOURCE	NM_153005
SMD	Hs.591353
SAGE	Hs.591353
GO	nucleotide binding [Amigo]  nucleotide binding
GO	protein serine/threonine kinase activity [Amigo]  protein serine/threonine kinase activity
GO	ATP binding [Amigo]  ATP binding
GO	kinase activity [Amigo]  kinase activity
GO	transferase activity [Amigo]  transferase activity
PubGene	RIOK1
TreeFam	RIOK1
CTD	83732 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RIOK1 Related clones (RZPD - Berlin)
	PubMed
PubMed	6 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:52:26 2008