RNF125 (ring finger protein 125)

Identity

Other names	FLJ20456
	MGC21737
	TRAC1
HGNC	RNF125
Location	18q12.1
Location_base_pair	Starts at 27852443 and ends at 27907152 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RNF125   21150
Entrez_Gene	RNF125  54941  ring finger protein 125
	Cards
GeneCards	RNF125
Ensembl	ENSG00000101695 [Gene_View]  RNF125 [Vega]
Genatlas	RNF125
	Genomic and cartography
GoldenPath	RNF125  -  18q12.1   chr18:27852443-27907152 +  18q12.1   [Description]    (hg18-March_2006)
Ensembl	RNF125 - 18q12.1 [CytoView]
NCBI	Mapview
OMIM	610432 Disease map [OMIM]
HomoloGene	RNF125
	Gene and transcription
Genbank	AK000463 [ ENTREZ ]
Genbank	AK027134 [ ENTREZ ]
Genbank	AK225518 [ ENTREZ ]
Genbank	BC012021 [ ENTREZ ]
Genbank	BI666910 [ ENTREZ ]
RefSeq	NM_017831 [ SRS ]    NM_017831 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
CCDS	RNF125 CCDS - NCBI
AceView	RNF125 AceView - NCBI
Unigene	Hs.633703 [ SRS ]    Hs.633703 [ NCBI ]
Fast-db	3167 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q96EQ8 [ SRS]    Q96EQ8 [ EXPASY ]     Q96EQ8 [ INTERPRO ]     Q96EQ8 [ UNIPROT ] Q96EQ8 [ VarSplice FASTA ]
Prosite	PS00518 ZF_RING_1 [ SRS ]    PS00518 ZF_RING_1 [ Expasy ]
Prosite	PS50089 ZF_RING_2 [ SRS ]    PS50089 ZF_RING_2 [ Expasy ]
Interpro	IPR015880 Znf_C2H2-like [ SRS ]    IPR015880 Znf_C2H2-like [ EBI ]
Interpro	IPR001841 Znf_RING [ SRS ]    IPR001841 Znf_RING [ EBI ]
Interpro	IPR013083 Znf_RING/FYVE/PHD [ SRS ]    IPR013083 Znf_RING/FYVE/PHD [ EBI ]
CluSTr	Q96EQ8
Pfam	PF00097 zf-C3HC4 [ SRS ]    PF00097 zf-C3HC4 [ Sanger ]    pfam00097 [ NCBI-CDD ]
Smart	SM00184 RING [EMBL]
Smart	SM00355 ZnF_C2H2 [EMBL]
Blocks	Q96EQ8
HPRD	11500
	Protein Interaction databases
DIP	Q96EQ8
IntAct	Q96EQ8
	Polymorphism : SNP, mutations, diseases
OMIM	610432    [ map ]
GENETests	610432
SNP	RNF125 [dbSNP-NCBI]
SNP	NM_017831 [SNP-NCI]
SNP	RNF125 [GeneSNPs - Utah]  RNF125] [HGBASE - SRS]
HAPMAP	RNF125 [HAPMAP]
COSMIC	RNF125 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RNF125
Genetic Association	RNF125
CDC HuGE	RNF125
	General knowledge
Family Browser	RNF125 [UCSC Family Browser]
SOURCE	NM_017831
SMD	Hs.633703
SAGE	Hs.633703
Enzyme	6.3.2.- [ Enzyme-Expasy ]   6.3.2.- [ Enzyme-SRS ]   6.3.2.- [ IntEnz-EBI ]   6.3.2.- [ BRENDA ]   6.3.2.- [ KEGG ]
GO	protein binding [Amigo]  protein binding
GO	intracellular [Amigo]  intracellular
GO	immune response [Amigo]  immune response
GO	zinc ion binding [Amigo]  zinc ion binding
GO	ligase activity [Amigo]  ligase activity
GO	metal ion binding [Amigo]  metal ion binding
PubGene	RNF125
TreeFam	RNF125
CTD	54941 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RNF125 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:06:20 2008