RNF17 (ring finger protein 17)

Identity

Other names	FLJ11045
	Mmip-2
	SPATA23
	TDRD4
HGNC	RNF17
Location	13q12.13
Location_base_pair	Starts at 24236301 and ends at 24352058 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	RNF17   10060
Entrez_Gene	RNF17  56163  ring finger protein 17
	Cards
GeneCards	RNF17
Ensembl	RNF17 [Search_View]   ENSG00000132972 [Gene_View]
Genatlas	RNF17
GeneLynx	RNF17
eGenome	RNF17
euGene	56163
	Genomic and cartography
GoldenPath	RNF17  -  13q12.13   chr13:24236301-24352058 +  13q12.12   [Description]    (hg18-March_2006)
Ensembl	RNF17 - 13q12.12 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	RNF17
	Gene and transcription
Genbank	AF285602 [ ENTREZ ]
Genbank	AF285603 [ ENTREZ ]
Genbank	AK001907 [ ENTREZ ]
Genbank	BC064847 [ ENTREZ ]
Genbank	BC146822 [ ENTREZ ]
RefSeq	NM_031277 [ SRS ]    NM_031277 [ ENTREZ ]
RefSeq	AC_000056 [ SRS ]    AC_000056 [ ENTREZ ]
RefSeq	AC_000145 [ SRS ]    AC_000145 [ ENTREZ ]
RefSeq	NC_000013 [ SRS ]    NC_000013 [ ENTREZ ]
RefSeq	NT_024524 [ SRS ]    NT_024524 [ ENTREZ ]
RefSeq	NW_001838070 [ SRS ]    NW_001838070 [ ENTREZ ]
RefSeq	NW_925473 [ SRS ]    NW_925473 [ ENTREZ ]
AceView	RNF17 AceView - NCBI
Unigene	Hs.97464 [ SRS ]    Hs.97464 [ NCBI ]     HS97464 [ spliceNest ]
Fast-db	1181 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5T2J8 [ SRS]    Q5T2J8 [ EXPASY ]     Q5T2J8 [ INTERPRO ]     Q5T2J8 [ UNIPROT ]
Prosite	PS50304 TUDOR [ SRS ]    PS50304 TUDOR [ Expasy ]
Interpro	IPR008191 Maternal_tudor [ SRS ]    IPR008191 Maternal_tudor [ EBI ]
Interpro	IPR002999 Tudor [ SRS ]    IPR002999 Tudor [ EBI ]
CluSTr	Q5T2J8
Pfam	PF00567 TUDOR [ SRS ]    PF00567 TUDOR [ Sanger ]    pfam00567 [ NCBI-CDD ]
Smart	SM00333 TUDOR [EMBL]
Blocks	Q5T2J8
HPRD	05779
	Protein Interaction databases
DIP	Q5T2J8
IntAct	Q5T2J8
	Polymorphism : SNP, mutations, diseases
OMIM	605793    [ map ]
GENECLINICS	605793
SNP	RNF17 [dbSNP-NCBI]
SNP	NM_031277 [SNP-NCI]
SNP	RNF17 [GeneSNPs - Utah]  RNF17] [HGBASE - SRS]
HAPMAP	RNF17 [HAPMAP]
COSMIC	RNF17 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	RNF17
	General knowledge
Family Browser	RNF17 [UCSC Family Browser]
SOURCE	NM_031277
SMD	Hs.97464
SAGE	Hs.97464
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	spermatogenesis [Amigo]  spermatogenesis
GO	zinc ion binding [Amigo]  zinc ion binding
GO	hydrolase activity, acting on ester bonds [Amigo]  hydrolase activity, acting on ester bonds
GO	cell differentiation [Amigo]  cell differentiation
GO	metal ion binding [Amigo]  metal ion binding
PubGene	RNF17
TreeFam	RNF17
CTD	56163 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	RNF17 Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:52:44 2008