S100P (S100 calcium binding protein P)

Identity

Other names	MIG9
Hugo	S100P
Location	4p16
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	S100P
GDB	S100P
Entrez_Gene	S100P  6286  S100 calcium binding protein P
	Cards
GeneCards	S100P
Ensembl	S100P [Search_View]   ENSG00000163993 [Gene_View]
Genatlas	S100P
GeneLynx	S100P
eGenome	S100P
euGene	6286
	Genomic and cartography
GoldenPath	S100P  -  4p16   chr4:6746467-6749797 +  4p16.1   [Description]    (hg18-March_2006)
Ensembl	S100P - 4p16.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	S100P
	Gene and transcription
Genbank	AF539739 [ ENTREZ ]
Genbank	AI202505 [ ENTREZ ]
Genbank	AY423724 [ ENTREZ ]
Genbank	BC006819 [ ENTREZ ]
Genbank	BI259919 [ ENTREZ ]
RefSeq	NM_005980 [ SRS ]    NM_005980 [ ENTREZ ]
RefSeq	AC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeq	NC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeq	NT_006051 [ SRS ]    NT_006051 [ ENTREZ ]
RefSeq	NW_921918 [ SRS ]    NW_921918 [ ENTREZ ]
AceView	S100P AceView - NCBI
Unigene	Hs.2962 [ SRS ]    Hs.2962 [ NCBI ]     HS2962 [ spliceNest ]
Fast-db	2039 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P25815 [ SRS]    P25815 [ EXPASY ]     P25815 [ INTERPRO ]
Prosite	PS00018 EF_HAND_1 [ SRS ]    PS00018 EF_HAND_1 [ Expasy ]
Prosite	PS50222 EF_HAND_2 [ SRS ]    PS50222 EF_HAND_2 [ Expasy ]
Prosite	PS00303 S100_CABP [ SRS ]    PS00303 S100_CABP [ Expasy ]
Interpro	IPR011992 EF-Hand_type [ SRS ]    IPR011992 EF-Hand_type [ EBI ]
Interpro	IPR002048 EF_hand_Ca_bd [ SRS ]    IPR002048 EF_hand_Ca_bd [ EBI ]
Interpro	IPR001751 S100_Ca_bd [ SRS ]    IPR001751 S100_Ca_bd [ EBI ]
Interpro	IPR013787 S100_Ca_bd_sub [ SRS ]    IPR013787 S100_Ca_bd_sub [ EBI ]
CluSTr	P25815
Pfam	PF01023 S_100 [ SRS ]    PF01023 S_100 [ Sanger ]    pfam01023 [ NCBI-CDD ]
Prodom	PD003407 CaBP_S100[INRA-Toulouse]
Prodom	P25815 S100P_HUMAN [ Domain structure ]   P25815 S100P_HUMAN  [ sequences sharing at least 1 domain ]
Prodom	PD003407[INRA-Toulouse]
Prodom	P25815 S100P_HUMAN [ Domain structure ]   P25815 S100P_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P25815
PDB	1J55 [ SRS ]    1J55 [ PdbSum ],   1J55 [ IMB ]   1J55 [ RSDB ]
PDB	1OZO [ SRS ]    1OZO [ PdbSum ],   1OZO [ IMB ]   1OZO [ RSDB ]
HPRD	02792
	Protein Interaction databases
DIP	P25815
IntAct	P25815
	Polymorphism : SNP, mutations, diseases
OMIM	600614    [ map ]
GENECLINICS	600614
SNP	S100P [dbSNP-NCBI]
SNP	NM_005980 [SNP-NCI]
SNP	S100P [GeneSNPs - Utah]  S100P] [HGBASE - SRS]
HAPMAP	S100P [HAPMAP]
HGMD	S100P
	General knowledge
Family Browser	S100P [UCSC Family Browser]
SOURCE	NM_005980
SMD	Hs.2962
SAGE	Hs.2962
GO	magnesium ion binding [Amigo]  magnesium ion binding
GO	calcium ion binding [Amigo]  calcium ion binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	endothelial cell migration [Amigo]  endothelial cell migration
GO	calcium-dependent protein binding [Amigo]  calcium-dependent protein binding
PubGene	S100P
TreeFam	S100P
CTD	6286 [Comparative Genomics Database]
	Other databases
	Probes
Probe	S100P Related clones (RZPD - Berlin)
	PubMed
PubMed	29 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:27:21 2008