SAFB2 (scaffold attachment factor B2)

Identity

Other names	KIAA0138
HGNC	SAFB2
Location	19p13.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SAFB2   21605
Entrez_Gene	SAFB2  9667  scaffold attachment factor B2
	Cards
GeneCards	SAFB2
Ensembl	SAFB2 [Search_View]   ENSG00000130254 [Gene_View]
Genatlas	SAFB2
GeneLynx	SAFB2
eGenome	SAFB2
euGene	9667
	Genomic and cartography
GoldenPath	SAFB2  -  19p13.3   chr19:5538010-5573938 -  19p13.3   [Description]    (hg18-March_2006)
Ensembl	SAFB2 - 19p13.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SAFB2
	Gene and transcription
Genbank	AK123246 [ ENTREZ ]
Genbank	AW136754 [ ENTREZ ]
Genbank	BC001216 [ ENTREZ ]
Genbank	BC014784 [ ENTREZ ]
Genbank	BC025279 [ ENTREZ ]
RefSeq	NM_014649 [ SRS ]    NM_014649 [ ENTREZ ]
RefSeq	AC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeq	AC_000151 [ SRS ]    AC_000151 [ ENTREZ ]
RefSeq	NC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeq	NT_011255 [ SRS ]    NT_011255 [ ENTREZ ]
RefSeq	NW_001838477 [ SRS ]    NW_001838477 [ ENTREZ ]
RefSeq	NW_927173 [ SRS ]    NW_927173 [ ENTREZ ]
AceView	SAFB2 AceView - NCBI
Unigene	Hs.655392 [ SRS ]    Hs.655392 [ NCBI ]     HS655392 [ spliceNest ]
Fast-db	3205 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q14151 [ SRS]    Q14151 [ EXPASY ]     Q14151 [ INTERPRO ]     Q14151 [ UNIPROT ]
Prosite	PS50102 RRM [ SRS ]    PS50102 RRM [ Expasy ]
Prosite	PS50800 SAP [ SRS ]    PS50800 SAP [ Expasy ]
Interpro	IPR012677 a_b_plait_nuc_bd [ SRS ]    IPR012677 a_b_plait_nuc_bd [ EBI ]
Interpro	IPR000504 RRM_RNP1 [ SRS ]    IPR000504 RRM_RNP1 [ EBI ]
Interpro	IPR003034 SAP_DNA_bd [ SRS ]    IPR003034 SAP_DNA_bd [ EBI ]
CluSTr	Q14151
Pfam	PF00076 RRM_1 [ SRS ]    PF00076 RRM_1 [ Sanger ]    pfam00076 [ NCBI-CDD ]
Pfam	PF02037 SAP [ SRS ]    PF02037 SAP [ Sanger ]    pfam02037 [ NCBI-CDD ]
Smart	SM00360 RRM [EMBL]
Smart	SM00513 SAP [EMBL]
Blocks	Q14151
HPRD	06424
	Protein Interaction databases
DIP	Q14151
IntAct	Q14151
	Polymorphism : SNP, mutations, diseases
OMIM	608066    [ map ]
GENECLINICS	608066
SNP	SAFB2 [dbSNP-NCBI]
SNP	NM_014649 [SNP-NCI]
SNP	SAFB2 [GeneSNPs - Utah]  SAFB2] [HGBASE - SRS]
HAPMAP	SAFB2 [HAPMAP]
HGMD	SAFB2
	General knowledge
Family Browser	SAFB2 [UCSC Family Browser]
SOURCE	NM_014649
SMD	Hs.655392
SAGE	Hs.655392
GO	nucleotide binding [Amigo]  nucleotide binding
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
PubGene	SAFB2
TreeFam	SAFB2
CTD	9667 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SAFB2 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 18:20:48 2008