SDF2L1 (stromal cell-derived factor 2-like 1)

Identity

Other names	-
HGNC	SDF2L1
Location	22q11.21
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SDF2L1   10676
Entrez_Gene	SDF2L1  23753  stromal cell-derived factor 2-like 1
	Cards
GeneCards	SDF2L1
Ensembl	SDF2L1 [Search_View]   ENSG00000128228 [Gene_View]
Genatlas	SDF2L1
GeneLynx	SDF2L1
eGenome	SDF2L1
euGene	23753
	Genomic and cartography
GoldenPath	SDF2L1  -  22q11.21   chr22:20326542-20328588 +  22q11.21   [Description]    (hg18-March_2006)
Ensembl	SDF2L1 - 22q11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SDF2L1
	Gene and transcription
Genbank	AB043007 [ ENTREZ ]
Genbank	AF277316 [ ENTREZ ]
Genbank	AY359118 [ ENTREZ ]
Genbank	BC132849 [ ENTREZ ]
Genbank	BC132851 [ ENTREZ ]
RefSeq	NM_022044 [ SRS ]    NM_022044 [ ENTREZ ]
RefSeq	AC_000065 [ SRS ]    AC_000065 [ ENTREZ ]
RefSeq	AC_000154 [ SRS ]    AC_000154 [ ENTREZ ]
RefSeq	NC_000022 [ SRS ]    NC_000022 [ ENTREZ ]
RefSeq	NT_011520 [ SRS ]    NT_011520 [ ENTREZ ]
RefSeq	NW_001838745 [ SRS ]    NW_001838745 [ ENTREZ ]
RefSeq	NW_927628 [ SRS ]    NW_927628 [ ENTREZ ]
AceView	SDF2L1 AceView - NCBI
Unigene	Hs.303116 [ SRS ]    Hs.303116 [ NCBI ]     HS303116 [ spliceNest ]
Fast-db	2107 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q86U75 [ SRS]    Q86U75 [ EXPASY ]     Q86U75 [ INTERPRO ]     Q86U75 [ UNIPROT ]
Prosite	PS00014 ER_TARGET [ SRS ]    PS00014 ER_TARGET [ Expasy ]
Prosite	PS50919 MIR [ SRS ]    PS50919 MIR [ Expasy ]
Interpro	IPR006680 Amidohydro_1 [ SRS ]    IPR006680 Amidohydro_1 [ EBI ]
Interpro	IPR011778 D-hydantoinase [ SRS ]    IPR011778 D-hydantoinase [ EBI ]
Interpro	IPR000886 ER_targeting_sequence [ SRS ]    IPR000886 ER_targeting_sequence [ EBI ]
Interpro	IPR003608 MIR [ SRS ]    IPR003608 MIR [ EBI ]
Interpro	IPR016093 MIR_motif [ SRS ]    IPR016093 MIR_motif [ EBI ]
CluSTr	Q86U75
Pfam	PF01979 Amidohydro_1 [ SRS ]    PF01979 Amidohydro_1 [ Sanger ]    pfam01979 [ NCBI-CDD ]
Pfam	PF02815 MIR [ SRS ]    PF02815 MIR [ Sanger ]    pfam02815 [ NCBI-CDD ]
Smart	SM00472 MIR [EMBL]
Blocks	Q86U75
HPRD	09614
	Protein Interaction databases
DIP	Q86U75
IntAct	Q86U75
	Polymorphism : SNP, mutations, diseases
OMIM	607551    [ map ]
GENECLINICS	607551
SNP	SDF2L1 [dbSNP-NCBI]
SNP	NM_022044 [SNP-NCI]
SNP	SDF2L1 [GeneSNPs - Utah]  SDF2L1] [HGBASE - SRS]
HAPMAP	SDF2L1 [HAPMAP]
HGMD	SDF2L1
	General knowledge
Family Browser	SDF2L1 [UCSC Family Browser]
SOURCE	NM_022044
SMD	Hs.303116
SAGE	Hs.303116
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	membrane [Amigo]  membrane
GO	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Amigo]  hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
PubGene	SDF2L1
TreeFam	SDF2L1
CTD	23753 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SDF2L1 Related clones (RZPD - Berlin)
	PubMed
PubMed	6 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:31:07 2008