SDF4 (stromal cell derived factor 4)

Identity

Other names	Cab45
HGNC	SDF4
Location	1p36.33
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SDF4   24188
Entrez_Gene	SDF4  51150  stromal cell derived factor 4
	Cards
GeneCards	SDF4
Ensembl	SDF4 [Search_View]   ENSG00000078808 [Gene_View]
Genatlas	SDF4
GeneLynx	SDF4
eGenome	SDF4
euGene	51150
	Genomic and cartography
GoldenPath	SDF4  -  1p36.33   chr1:1142151-1157310 -  1p36.33   [Description]    (hg18-March_2006)
Ensembl	SDF4 - 1p36.33 [CytoView]
NCBI	Mapview
HomoloGene	SDF4
	Gene and transcription
Genbank	AF132749 [ ENTREZ ]
Genbank	AF153686 [ ENTREZ ]
Genbank	AF178986 [ ENTREZ ]
Genbank	AK000717 [ ENTREZ ]
Genbank	AK027277 [ ENTREZ ]
RefSeq	NM_016176 [ SRS ]    NM_016176 [ ENTREZ ]
RefSeq	NM_016547 [ SRS ]    NM_016547 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004350 [ SRS ]    NT_004350 [ ENTREZ ]
RefSeq	NW_001838585 [ SRS ]    NW_001838585 [ ENTREZ ]
RefSeq	NW_921350 [ SRS ]    NW_921350 [ ENTREZ ]
AceView	SDF4 AceView - NCBI
Unigene	Hs.42806 [ SRS ]    Hs.42806 [ NCBI ]     HS42806 [ spliceNest ]
Fast-db	288 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q53G52 [ SRS]    Q53G52 [ EXPASY ]     Q53G52 [ INTERPRO ]     Q53G52 [ UNIPROT ]
Prosite	PS00018 EF_HAND_1 [ SRS ]    PS00018 EF_HAND_1 [ Expasy ]
Prosite	PS50222 EF_HAND_2 [ SRS ]    PS50222 EF_HAND_2 [ Expasy ]
Interpro	IPR011992 EF-Hand_type [ SRS ]    IPR011992 EF-Hand_type [ EBI ]
Interpro	IPR002048 EF_hand_Ca_bd [ SRS ]    IPR002048 EF_hand_Ca_bd [ EBI ]
CluSTr	Q53G52
Pfam	PF00036 efhand [ SRS ]    PF00036 efhand [ Sanger ]    pfam00036 [ NCBI-CDD ]
Smart	SM00054 EFh [EMBL]
Prodom	PD000012 EF-hand[INRA-Toulouse]
Prodom	Q53G52 Q53G52_HUMAN [ Domain structure ]   Q53G52 Q53G52_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q53G52
HPRD	13113
	Protein Interaction databases
DIP	Q53G52
IntAct	Q53G52
	Polymorphism : SNP, mutations, diseases
SNP	SDF4 [dbSNP-NCBI]
SNP	NM_016176 [SNP-NCI]
SNP	NM_016547 [SNP-NCI]
SNP	SDF4 [GeneSNPs - Utah]  SDF4] [HGBASE - SRS]
HAPMAP	SDF4 [HAPMAP]
HGMD	SDF4
	General knowledge
Family Browser	SDF4 [UCSC Family Browser]
SOURCE	NM_016176
SOURCE	NM_016547
SMD	Hs.42806
SAGE	Hs.42806
GO	calcium ion binding [Amigo]  calcium ion binding
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	Golgi lumen [Amigo]  Golgi lumen
PubGene	SDF4
TreeFam	SDF4
CTD	51150 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SDF4 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:31:08 2008