SIGLEC7 (sialic acid binding Ig-like lectin 7)

Identity

Other names	AIRM1
	CD328
	CDw328
	D-siglec
	QA79
	SIGLEC-7
	p75
	p75/AIRM1
HGNC	SIGLEC7
Location	19q13.3
Location_base_pair	Starts at 56337370 and ends at 56348595 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SIGLEC7   10876
Entrez_Gene	SIGLEC7  27036  sialic acid binding Ig-like lectin 7
	Cards
GeneCards	SIGLEC7
Ensembl	ENSG00000168995 [Gene_View]  SIGLEC7 [Vega]
Genatlas	SIGLEC7
	Genomic and cartography
GoldenPath	SIGLEC7  -  19q13.3   chr19:56337370-56348595 +  19q13.33   [Description]    (hg18-March_2006)
Ensembl	SIGLEC7 - 19q13.33 [CytoView]
NCBI	Mapview
OMIM	604410 Disease map [OMIM]
HomoloGene	SIGLEC7
	Gene and transcription
Genbank	AF170485 [ ENTREZ ]
Genbank	AF178981 [ ENTREZ ]
Genbank	AF193441 [ ENTREZ ]
Genbank	AJ007395 [ ENTREZ ]
Genbank	AJ130710 [ ENTREZ ]
RefSeq	NM_014385 [ SRS ]    NM_014385 [ ENTREZ ]
RefSeq	NM_016543 [ SRS ]    NM_016543 [ ENTREZ ]
RefSeq	AC_000062 [ SRS ]    AC_000062 [ ENTREZ ]
RefSeq	AC_000151 [ SRS ]    AC_000151 [ ENTREZ ]
RefSeq	NC_000019 [ SRS ]    NC_000019 [ ENTREZ ]
RefSeq	NT_011109 [ SRS ]    NT_011109 [ ENTREZ ]
RefSeq	NW_001838498 [ SRS ]    NW_001838498 [ ENTREZ ]
RefSeq	NW_927284 [ SRS ]    NW_927284 [ ENTREZ ]
CCDS	SIGLEC7 CCDS - NCBI
AceView	SIGLEC7 AceView - NCBI
Unigene	Hs.655393 [ SRS ]    Hs.655393 [ NCBI ]
Fast-db	14792 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9Y286 [ SRS]    Q9Y286 [ EXPASY ]     Q9Y286 [ INTERPRO ]     Q9Y286 [ UNIPROT ] Q9Y286 [ VarSplice FASTA ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR013162 CD80_C2-set [ SRS ]    IPR013162 CD80_C2-set [ EBI ]
Interpro	IPR013151 Ig [ SRS ]    IPR013151 Ig [ EBI ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR003598 Ig_sub2 [ SRS ]    IPR003598 Ig_sub2 [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	Q9Y286
Pfam	PF08205 C2-set_2 [ SRS ]    PF08205 C2-set_2 [ Sanger ]    pfam08205 [ NCBI-CDD ]
Pfam	PF00047 ig [ SRS ]    PF00047 ig [ Sanger ]    pfam00047 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Smart	SM00408 IGc2 [EMBL]
Blocks	Q9Y286
PDB	1NKO [ SRS ]    1NKO [ PdbSum ],   1NKO [ IMB ]   1NKO [ RSDB ]
PDB	1O7S [ SRS ]    1O7S [ PdbSum ],   1O7S [ IMB ]   1O7S [ RSDB ]
PDB	1O7V [ SRS ]    1O7V [ PdbSum ],   1O7V [ IMB ]   1O7V [ RSDB ]
PDB	2DF3 [ SRS ]    2DF3 [ PdbSum ],   2DF3 [ IMB ]   2DF3 [ RSDB ]
PDB	2G5R [ SRS ]    2G5R [ PdbSum ],   2G5R [ IMB ]   2G5R [ RSDB ]
PDB	2HRL [ SRS ]    2HRL [ PdbSum ],   2HRL [ IMB ]   2HRL [ RSDB ]
HPRD	05102
	Protein Interaction databases
DIP	Q9Y286
IntAct	Q9Y286
	Polymorphism : SNP, mutations, diseases
OMIM	604410    [ map ]
GENETests	604410
SNP	SIGLEC7 [dbSNP-NCBI]
SNP	NM_014385 [SNP-NCI]
SNP	NM_016543 [SNP-NCI]
SNP	SIGLEC7 [GeneSNPs - Utah]  SIGLEC7] [HGBASE - SRS]
HAPMAP	SIGLEC7 [HAPMAP]
HGMD	SIGLEC7
Genetic Association	SIGLEC7
CDC HuGE	SIGLEC7
	General knowledge
Family Browser	SIGLEC7 [UCSC Family Browser]
SOURCE	NM_014385
SOURCE	NM_016543
SMD	Hs.655393
SAGE	Hs.655393
GO	receptor activity [Amigo]  receptor activity
GO	protein binding [Amigo]  protein binding
GO	sugar binding [Amigo]  sugar binding
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	membrane [Amigo]  membrane
PubGene	SIGLEC7
TreeFam	SIGLEC7
CTD	27036 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SIGLEC7 Related clones (RZPD - Berlin)
	PubMed
PubMed	20 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:08:27 2008