SIRPA (signal-regulatory protein alpha)

Identity

Other names	BIT
	CD172A
	MFR
	MYD-1
	P84
	PTPNS1
	SHPS-1
	SHPS1
	SIRP
	SIRP-ALPHA-1
	SIRPalpha
	SIRPalpha2
HGNC	SIRPA
Location	20p13
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SIRPA   9662
Entrez_Gene	SIRPA  140885  signal-regulatory protein alpha
	Cards
GeneCards	SIRPA
Ensembl	SIRPA [Search_View]   ENSG00000198053 [Gene_View]
Genatlas	SIRPA
GeneLynx	SIRPA
eGenome	SIRPA
euGene	140885
	Genomic and cartography
GoldenPath	SIRPA  -  20p13   chr20:1822813-1868540 +  20p13   [Description]    (hg18-March_2006)
Ensembl	SIRPA - 20p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SIRPA
	Gene and transcription
Genbank	AB023430 [ ENTREZ ]
Genbank	AK290776 [ ENTREZ ]
Genbank	AK312521 [ ENTREZ ]
Genbank	BC026692 [ ENTREZ ]
Genbank	BC033092 [ ENTREZ ]
RefSeq	NM_001040022 [ SRS ]    NM_001040022 [ ENTREZ ]
RefSeq	NM_001040023 [ SRS ]    NM_001040023 [ ENTREZ ]
RefSeq	NM_080792 [ SRS ]    NM_080792 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	SIRPA AceView - NCBI
Unigene	Hs.679042 [ SRS ]    Hs.679042 [ NCBI ]     HS679042 [ spliceNest ]
Fast-db	1332 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P78324 [ SRS]    P78324 [ EXPASY ]     P78324 [ INTERPRO ]     P78324 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003597 Ig_C1-set [ SRS ]    IPR003597 Ig_C1-set [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	P78324
Pfam	PF07654 C1-set [ SRS ]    PF07654 C1-set [ Sanger ]    pfam07654 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Smart	SM00407 IGc1 [EMBL]
Blocks	P78324
PDB	2UV3 [ SRS ]    2UV3 [ PdbSum ],   2UV3 [ IMB ]   2UV3 [ RSDB ]
HPRD	03912
	Protein Interaction databases
DIP	P78324
IntAct	P78324
	Polymorphism : SNP, mutations, diseases
OMIM	602461    [ map ]
GENECLINICS	602461
SNP	SIRPA [dbSNP-NCBI]
SNP	NM_001040022 [SNP-NCI]
SNP	NM_001040023 [SNP-NCI]
SNP	NM_080792 [SNP-NCI]
SNP	SIRPA [GeneSNPs - Utah]  SIRPA] [HGBASE - SRS]
HAPMAP	SIRPA [HAPMAP]
COSMIC	SIRPA [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	SIRPA
	General knowledge
Family Browser	SIRPA [UCSC Family Browser]
SOURCE	NM_001040022
SOURCE	NM_001040023
SOURCE	NM_080792
SMD	Hs.679042
SAGE	Hs.679042
GO	plasma membrane [Amigo]  plasma membrane
GO	plasma membrane [Amigo]  plasma membrane
GO	cell adhesion [Amigo]  cell adhesion
GO	integral to membrane [Amigo]  integral to membrane
PubGene	SIRPA
TreeFam	SIRPA
CTD	140885 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SIRPA Related clones (RZPD - Berlin)
	PubMed
PubMed	47 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:31:51 2008