SIRPB1 (signal-regulatory protein beta 1)

Identity

Other names	CD172b
	DKFZp686A05192
	FLJ26614
	SIRP-BETA-1
HGNC	SIRPB1
Location	20p13
Location_base_pair	Starts at 1493029 and ends at 1548689 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SIRPB1   15928
Entrez_Gene	SIRPB1  10326  signal-regulatory protein beta 1
	Cards
GeneCards	SIRPB1
Ensembl	SIRPB1 [Search_View]   ENSG00000101307 [Gene_View]
Genatlas	SIRPB1
GeneLynx	SIRPB1
eGenome	SIRPB1
euGene	10326
	Genomic and cartography
GoldenPath	SIRPB1  -  20p13   chr20:1493029-1548689 -  20p13   [Description]    (hg18-March_2006)
Ensembl	SIRPB1 - 20p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SIRPB1
	Gene and transcription
Genbank	AK130124 [ ENTREZ ]
Genbank	AK289866 [ ENTREZ ]
Genbank	BC025286 [ ENTREZ ]
Genbank	BC075835 [ ENTREZ ]
Genbank	BC131747 [ ENTREZ ]
RefSeq	NM_001083910 [ SRS ]    NM_001083910 [ ENTREZ ]
RefSeq	NM_006065 [ SRS ]    NM_006065 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	SIRPB1 AceView - NCBI
Unigene	Hs.710882 [ SRS ]    Hs.710882 [ NCBI ]     HS710882 [ spliceNest ]
Fast-db	1294 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O00241 [ SRS]    O00241 [ EXPASY ]     O00241 [ INTERPRO ]     O00241 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003597 Ig_C1-set [ SRS ]    IPR003597 Ig_C1-set [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	O00241
Pfam	PF07654 C1-set [ SRS ]    PF07654 C1-set [ Sanger ]    pfam07654 [ NCBI-CDD ]
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Smart	SM00407 IGc1 [EMBL]
Blocks	O00241
PDB	2D9C [ SRS ]    2D9C [ PdbSum ],   2D9C [ IMB ]   2D9C [ RSDB ]
HPRD	04866
	Protein Interaction databases
DIP	O00241
IntAct	O00241
	Polymorphism : SNP, mutations, diseases
OMIM	603889    [ map ]
GENECLINICS	603889
SNP	SIRPB1 [dbSNP-NCBI]
SNP	NM_001083910 [SNP-NCI]
SNP	NM_006065 [SNP-NCI]
SNP	SIRPB1 [GeneSNPs - Utah]  SIRPB1] [HGBASE - SRS]
HAPMAP	SIRPB1 [HAPMAP]
HGMD	SIRPB1
	General knowledge
Family Browser	SIRPB1 [UCSC Family Browser]
SOURCE	NM_001083910
SOURCE	NM_006065
SMD	Hs.710882
SAGE	Hs.710882
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	cell surface receptor linked signal transduction [Amigo]  cell surface receptor linked signal transduction
GO	membrane [Amigo]  membrane
PubGene	SIRPB1
TreeFam	SIRPB1
CTD	10326 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SIRPB1 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:32:14 2008