SIRPB2 (signal-regulatory protein beta 2)

Identity

Other names	PTPN1L
	PTPNS1L3
	dJ776F14.2
HGNC	SIRPB2
Location	20p13
Location_base_pair	Starts at 1403236 and ends at 1420233 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	SIRPB2   16247
Entrez_Gene	SIRPB2  284759  signal-regulatory protein beta 2
	Cards
GeneCards	SIRPB2
Ensembl	SIRPB2 [Search_View]   ENSG00000196209 [Gene_View]
Genatlas	SIRPB2
GeneLynx	SIRPB2
eGenome	SIRPB2
euGene	284759
	Genomic and cartography
GoldenPath	SIRPB2  -  20p13   chr20:1403236-1420233 -  20p13   [Description]    (hg18-March_2006)
Ensembl	SIRPB2 - 20p13 [CytoView]
NCBI	Mapview
HomoloGene	SIRPB2
	Gene and transcription
Genbank	AK095499 [ ENTREZ ]
Genbank	AY424277 [ ENTREZ ]
Genbank	BG539998 [ ENTREZ ]
Genbank	BM285394 [ ENTREZ ]
Genbank	BQ635335 [ ENTREZ ]
RefSeq	NM_001122962 [ SRS ]    NM_001122962 [ ENTREZ ]
RefSeq	AC_000063 [ SRS ]    AC_000063 [ ENTREZ ]
RefSeq	AC_000152 [ SRS ]    AC_000152 [ ENTREZ ]
RefSeq	NC_000020 [ SRS ]    NC_000020 [ ENTREZ ]
RefSeq	NT_011387 [ SRS ]    NT_011387 [ ENTREZ ]
RefSeq	NW_001838652 [ SRS ]    NW_001838652 [ ENTREZ ]
RefSeq	NW_927317 [ SRS ]    NW_927317 [ ENTREZ ]
AceView	SIRPB2 AceView - NCBI
Unigene	Hs.12865 [ SRS ]    Hs.12865 [ NCBI ]     HS12865 [ spliceNest ]
Fast-db	1270 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q5JXA8 [ SRS]    Q5JXA8 [ EXPASY ]     Q5JXA8 [ INTERPRO ]     Q5JXA8 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003599 Ig_sub [ SRS ]    IPR003599 Ig_sub [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
CluSTr	Q5JXA8
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00409 IG [EMBL]
Blocks	Q5JXA8
	Protein Interaction databases
DIP	Q5JXA8
IntAct	Q5JXA8
	Polymorphism : SNP, mutations, diseases
SNP	SIRPB2 [dbSNP-NCBI]
SNP	NM_001122962 [SNP-NCI]
SNP	SIRPB2 [GeneSNPs - Utah]  SIRPB2] [HGBASE - SRS]
HAPMAP	SIRPB2 [HAPMAP]
COSMIC	SIRPB2 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	SIRPB2
	General knowledge
Family Browser	SIRPB2 [UCSC Family Browser]
SOURCE	NM_001122962
SMD	Hs.12865
SAGE	Hs.12865
GO	receptor activity [Amigo]  receptor activity
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
PubGene	SIRPB2
TreeFam	SIRPB2
CTD	284759 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SIRPB2 Related clones (RZPD - Berlin)
	PubMed
PubMed	4 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:32:14 2008