SLC12A7 (solute carrier family 12 (potassium/chloride transporters), member 7)

Identity

Other names	DKFZP434F076
	KCC4
HGNC	SLC12A7
Location	5p15
Location_base_pair	Starts at 1103489 and ends at 1165172 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SLC12A7   10915
Entrez_Gene	SLC12A7  10723  solute carrier family 12 (potassium/chloride transporters), member 7
	Cards
GeneCards	SLC12A7
Ensembl	ENSG00000113504 [Gene_View]  SLC12A7 [Vega]
Genatlas	SLC12A7
	Genomic and cartography
GoldenPath	SLC12A7  -  5p15   chr5:1103489-1165172 -  5p15.33   [Description]    (hg18-March_2006)
Ensembl	SLC12A7 - 5p15.33 [CytoView]
NCBI	Mapview
OMIM	604879 Disease map [OMIM]
HomoloGene	SLC12A7
	Gene and transcription
Genbank	AF105365 [ ENTREZ ]
Genbank	AK024493 [ ENTREZ ]
Genbank	AK024497 [ ENTREZ ]
Genbank	AK026625 [ ENTREZ ]
Genbank	AL117433 [ ENTREZ ]
RefSeq	NM_006598 [ SRS ]    NM_006598 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838923 [ SRS ]    NW_001838923 [ ENTREZ ]
RefSeq	NW_922518 [ SRS ]    NW_922518 [ ENTREZ ]
CCDS	SLC12A7 CCDS - NCBI
AceView	SLC12A7 AceView - NCBI
Unigene	Hs.172613 [ SRS ]    Hs.172613 [ NCBI ]
Fast-db	934 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9Y666 [ SRS]    Q9Y666 [ EXPASY ]     Q9Y666 [ INTERPRO ]     Q9Y666 [ UNIPROT ] Q9Y666 [ VarSplice FASTA ]
Interpro	IPR000076 KCL_cotranspt [ SRS ]    IPR000076 KCL_cotranspt [ EBI ]
Interpro	IPR004842 NaKCl_cotransptS [ SRS ]    IPR004842 NaKCl_cotransptS [ EBI ]
Interpro	IPR004841 Permease_region [ SRS ]    IPR004841 Permease_region [ EBI ]
CluSTr	Q9Y666
Pfam	PF00324 AA_permease [ SRS ]    PF00324 AA_permease [ Sanger ]    pfam00324 [ NCBI-CDD ]
Blocks	Q9Y666
HPRD	09221
	Protein Interaction databases
DIP	Q9Y666
IntAct	Q9Y666
	Polymorphism : SNP, mutations, diseases
OMIM	604879    [ map ]
GENETests	604879
SNP	SLC12A7 [dbSNP-NCBI]
SNP	NM_006598 [SNP-NCI]
SNP	SLC12A7 [GeneSNPs - Utah]  SLC12A7] [HGBASE - SRS]
HAPMAP	SLC12A7 [HAPMAP]
HGMD	SLC12A7
Genetic Association	SLC12A7
CDC HuGE	SLC12A7
	General knowledge
Family Browser	SLC12A7 [UCSC Family Browser]
SOURCE	NM_006598
SMD	Hs.172613
SAGE	Hs.172613
GO	transporter activity [Amigo]  transporter activity
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	ion transport [Amigo]  ion transport
GO	potassium ion transport [Amigo]  potassium ion transport
GO	sodium ion transport [Amigo]  sodium ion transport
GO	chloride transport [Amigo]  chloride transport
GO	symporter activity [Amigo]  symporter activity
GO	potassium:chloride symporter activity [Amigo]  potassium:chloride symporter activity
GO	membrane [Amigo]  membrane
GO	potassium ion binding [Amigo]  potassium ion binding
PubGene	SLC12A7
TreeFam	SLC12A7
CTD	10723 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SLC12A7 Related clones (RZPD - Berlin)
	PubMed
PubMed	12 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:08:40 2008