SLC22A6 (solute carrier family 22 (organic anion transporter), member 6)

Identity

Other names	HOAT1
	MGC45260
	OAT1
	PAHT
	ROAT1
HGNC	SLC22A6
Location	11q12.3
Location_base_pair	Starts at 62500645 and ends at 62509045 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	SLC22A6   10970
Entrez_Gene	SLC22A6  9356  solute carrier family 22 (organic anion transporter), member 6
	Cards
GeneCards	SLC22A6
Ensembl	SLC22A6 [Search_View]   ENSG00000197901 [Gene_View]
Genatlas	SLC22A6
GeneLynx	SLC22A6
eGenome	SLC22A6
euGene	9356
	Genomic and cartography
GoldenPath	SLC22A6  -  11q12.3   chr11:62500645-62509045 -  11q12.3   [Description]    (hg18-March_2006)
Ensembl	SLC22A6 - 11q12.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SLC22A6
	Gene and transcription
Genbank	AB009697 [ ENTREZ ]
Genbank	AB009698 [ ENTREZ ]
Genbank	AF057039 [ ENTREZ ]
Genbank	AF097490 [ ENTREZ ]
Genbank	AF104038 [ ENTREZ ]
RefSeq	NM_004790 [ SRS ]    NM_004790 [ ENTREZ ]
RefSeq	NM_153276 [ SRS ]    NM_153276 [ ENTREZ ]
RefSeq	NM_153277 [ SRS ]    NM_153277 [ ENTREZ ]
RefSeq	NM_153278 [ SRS ]    NM_153278 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	AC_000143 [ SRS ]    AC_000143 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_033903 [ SRS ]    NT_033903 [ ENTREZ ]
RefSeq	NW_001838024 [ SRS ]    NW_001838024 [ ENTREZ ]
RefSeq	NW_925106 [ SRS ]    NW_925106 [ ENTREZ ]
AceView	SLC22A6 AceView - NCBI
Unigene	Hs.369252 [ SRS ]    Hs.369252 [ NCBI ]     HS369252 [ spliceNest ]
Fast-db	8361 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q4U2R8 [ SRS]    Q4U2R8 [ EXPASY ]     Q4U2R8 [ INTERPRO ]     Q4U2R8 [ UNIPROT ]
Prosite	PS50850 MFS [ SRS ]    PS50850 MFS [ Expasy ]
Interpro	IPR007114 MFS [ SRS ]    IPR007114 MFS [ EBI ]
Interpro	IPR011701 MFS_1 [ SRS ]    IPR011701 MFS_1 [ EBI ]
Interpro	IPR004749 Orgcat_transp [ SRS ]    IPR004749 Orgcat_transp [ EBI ]
CluSTr	Q4U2R8
Pfam	PF07690 MFS_1 [ SRS ]    PF07690 MFS_1 [ Sanger ]    pfam07690 [ NCBI-CDD ]
Blocks	Q4U2R8
HPRD	12125
	Protein Interaction databases
DIP	Q4U2R8
IntAct	Q4U2R8
	Polymorphism : SNP, mutations, diseases
OMIM	607582    [ map ]
GENECLINICS	607582
SNP	SLC22A6 [dbSNP-NCBI]
SNP	NM_004790 [SNP-NCI]
SNP	NM_153276 [SNP-NCI]
SNP	NM_153277 [SNP-NCI]
SNP	NM_153278 [SNP-NCI]
SNP	SLC22A6 [GeneSNPs - Utah]  SLC22A6] [HGBASE - SRS]
HAPMAP	SLC22A6 [HAPMAP]
HGMD	SLC22A6
	General knowledge
Family Browser	SLC22A6 [UCSC Family Browser]
SOURCE	NM_004790
SOURCE	NM_153276
SOURCE	NM_153277
SOURCE	NM_153278
SMD	Hs.369252
SAGE	Hs.369252
GO	transporter activity [Amigo]  transporter activity
GO	membrane fraction [Amigo]  membrane fraction
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	ion transport [Amigo]  ion transport
GO	organic anion transmembrane transporter activity [Amigo]  organic anion transmembrane transporter activity
GO	ion transmembrane transporter activity [Amigo]  ion transmembrane transporter activity
GO	organic anion transport [Amigo]  organic anion transport
GO	alpha-ketoglutarate transport [Amigo]  alpha-ketoglutarate transport
PubGene	SLC22A6
TreeFam	SLC22A6
CTD	9356 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SLC22A6 Related clones (RZPD - Berlin)
	PubMed
PubMed	32 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:01:56 2008