Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SLC2A4 (solute carrier family 2 (facilitated glucose transporter), member 4)

Identity

Other namesGLUT4
HGNC SLC2A4
Location 17p13
Location_base_pair Starts at 7125778 and ends at 7132091 bp from pter ( according to hg18-March_2006).
Note

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNCSLC2A4   11009
Entrez_GeneSLC2A4  6517  solute carrier family 2 (facilitated glucose transporter), member 4
Cards
GeneCardsSLC2A4
EnsemblSLC2A4 [Search_View]   ENSG00000181856 [Gene_View]
GenatlasSLC2A4
GeneLynxSLC2A4
eGenomeSLC2A4
euGene6517
Genomic and cartography
GoldenPathSLC2A4  -  17p13   chr17:7125778-7132091 +  17p13.1   [Description]    (hg18-March_2006)
EnsemblSLC2A4 - 17p13.1 [CytoView]
NCBIMapview
OMIMDisease map [OMIM]
HomoloGeneSLC2A4
Gene and transcription
GenbankAK313372 [ ENTREZ ]
GenbankAL521328 [ ENTREZ ]
GenbankBC034387 [ ENTREZ ]
GenbankBC069615 [ ENTREZ ]
GenbankBC069621 [ ENTREZ ]
RefSeqNM_001042 [ SRS ]    NM_001042 [ ENTREZ ]
RefSeqAC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeqAC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeqNC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeqNT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeqNW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeqNW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
AceViewSLC2A4 AceView - NCBI
UnigeneHs.380691 [ SRS ]    Hs.380691 [ NCBI ]     HS380691 [ spliceNest ]
Fast-db2825 (alternative variants)
Protein : pattern, domain, 3D structure
SwissProtP14672 [ SRS]    P14672 [ EXPASY ]     P14672 [ INTERPRO ]     P14672 [ UNIPROT ]
PrositePS50850 MFS [ SRS ]    PS50850 MFS [ Expasy ]
PrositePS00216 SUGAR_TRANSPORT_1 [ SRS ]    PS00216 SUGAR_TRANSPORT_1 [ Expasy ]
PrositePS00217 SUGAR_TRANSPORT_2 [ SRS ]    PS00217 SUGAR_TRANSPORT_2 [ Expasy ]
InterproIPR002441 Glu_transpt4 [ SRS ]    IPR002441 Glu_transpt4 [ EBI ]
InterproIPR000803 Gluc_transporter [ SRS ]    IPR000803 Gluc_transporter [ EBI ]
InterproIPR007114 MFS [ SRS ]    IPR007114 MFS [ EBI ]
InterproIPR005828 Sub_transporter [ SRS ]    IPR005828 Sub_transporter [ EBI ]
InterproIPR003663 Sugar/inositol_transpt [ SRS ]    IPR003663 Sugar/inositol_transpt [ EBI ]
InterproIPR005829 Sugar_transporter_CS [ SRS ]    IPR005829 Sugar_transporter_CS [ EBI ]
CluSTrP14672
PfamPF00083 Sugar_tr [ SRS ]    PF00083 Sugar_tr [ Sanger ]    pfam00083 [ NCBI-CDD ]
BlocksP14672
HPRD00688
Protein Interaction databases
DIPP14672
IntActP14672
Polymorphism : SNP, mutations, diseases
OMIM138190    [ map ]   
GENECLINICS138190
SNPSLC2A4 [dbSNP-NCBI]  
SNPNM_001042 [SNP-NCI]  
SNPSLC2A4 [GeneSNPs - Utah]  SLC2A4] [HGBASE - SRS]
HAPMAPSLC2A4 [HAPMAP]  
HGMDSLC2A4
General knowledge
Family BrowserSLC2A4 [UCSC Family Browser]
SOURCENM_001042
SMDHs.380691
SAGEHs.380691
GOintegral to membrane of membrane fraction [Amigo]  integral to membrane of membrane fraction
GOtransporter activity [Amigo]  transporter activity
GOsugar:hydrogen symporter activity [Amigo]  sugar:hydrogen symporter activity
GOglucose transmembrane transporter activity [Amigo]  glucose transmembrane transporter activity
GOprotein binding [Amigo]  protein binding
GOcytoplasm [Amigo]  cytoplasm
GOendosome [Amigo]  endosome
GOmicrosome [Amigo]  microsome
GOplasma membrane [Amigo]  plasma membrane
GOintegral to plasma membrane [Amigo]  integral to plasma membrane
GOcarbohydrate metabolic process [Amigo]  carbohydrate metabolic process
GOcarbohydrate transport [Amigo]  carbohydrate transport
GOexternal side of plasma membrane [Amigo]  external side of plasma membrane
GOvesicle membrane [Amigo]  vesicle membrane
GOglucose transport [Amigo]  glucose transport
GOsubstrate-specific transmembrane transporter activity [Amigo]  substrate-specific transmembrane transporter activity
GOtrans-Golgi network transport vesicle [Amigo]  trans-Golgi network transport vesicle
GOglucose homeostasis [Amigo]  glucose homeostasis
GOperinuclear region of cytoplasm [Amigo]  perinuclear region of cytoplasm
GOtransmembrane transport [Amigo]  transmembrane transport
BIOCARTAGrowth Hormone Signaling Pathway    [Genes]
BIOCARTAInsulin Signaling Pathway    [Genes]
BIOCARTARegulation of PGC-1a    [Genes]
KEGGInsulin signaling pathway
KEGGAdipocytokine signaling pathway
KEGGType II diabetes mellitus
PubGeneSLC2A4
TreeFamSLC2A4
CTD6517 [Comparative ToxicoGenomics Database]
Other databases
Probes
ProbeSLC2A4 Related clones (RZPD - Berlin)
PubMed
PubMed67 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated03-2008Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Oct 14 20:55:18 2008


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