SLC39A6 (solute carrier family 39 (zinc transporter), member 6)

Identity

Other names	LIV-1
HGNC	SLC39A6
Location	18q12.2
Location_base_pair	Starts at 31944961 and ends at 31963355 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SLC39A6   18607
Entrez_Gene	SLC39A6  25800  solute carrier family 39 (zinc transporter), member 6
	Cards
GeneCards	SLC39A6
Ensembl	ENSG00000141424 [Gene_View]  SLC39A6 [Vega]
Genatlas	SLC39A6
	Genomic and cartography
GoldenPath	SLC39A6  -  18q12.2   chr18:31944961-31963355 -  18q12.2   [Description]    (hg18-March_2006)
Ensembl	SLC39A6 - 18q12.2 [CytoView]
NCBI	Mapview
OMIM	608731 Disease map [OMIM]
HomoloGene	SLC39A6
	Gene and transcription
Genbank	AK304079 [ ENTREZ ]
Genbank	BC008317 [ ENTREZ ]
Genbank	BC039498 [ ENTREZ ]
Genbank	BX336036 [ ENTREZ ]
Genbank	CA443894 [ ENTREZ ]
RefSeq	NM_001099406 [ SRS ]    NM_001099406 [ ENTREZ ]
RefSeq	NM_012319 [ SRS ]    NM_012319 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NT_010966 [ SRS ]    NT_010966 [ ENTREZ ]
RefSeq	NW_001838467 [ SRS ]    NW_001838467 [ ENTREZ ]
RefSeq	NW_927095 [ SRS ]    NW_927095 [ ENTREZ ]
CCDS	SLC39A6 CCDS - NCBI
AceView	SLC39A6 AceView - NCBI
Unigene	Hs.79136 [ SRS ]    Hs.79136 [ NCBI ]
Fast-db	3662 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q13433 [ SRS]    Q13433 [ EXPASY ]     Q13433 [ INTERPRO ]     Q13433 [ UNIPROT ] Q13433 [ VarSplice FASTA ]
Interpro	IPR003689 ZIP [ SRS ]    IPR003689 ZIP [ EBI ]
CluSTr	Q13433
Pfam	PF02535 Zip [ SRS ]    PF02535 Zip [ Sanger ]    pfam02535 [ NCBI-CDD ]
Blocks	Q13433
HPRD	12285
	Protein Interaction databases
DIP	Q13433
IntAct	Q13433
	Polymorphism : SNP, mutations, diseases
OMIM	608731    [ map ]
GENETests	608731
SNP	SLC39A6 [dbSNP-NCBI]
SNP	NM_001099406 [SNP-NCI]
SNP	NM_012319 [SNP-NCI]
SNP	SLC39A6 [GeneSNPs - Utah]  SLC39A6] [HGBASE - SRS]
HAPMAP	SLC39A6 [HAPMAP]
HGMD	SLC39A6
Genetic Association	SLC39A6
CDC HuGE	SLC39A6
	General knowledge
Family Browser	SLC39A6 [UCSC Family Browser]
SOURCE	NM_001099406
SOURCE	NM_012319
SMD	Hs.79136
SAGE	Hs.79136
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	plasma membrane [Amigo]  plasma membrane
GO	ion transport [Amigo]  ion transport
GO	zinc ion transport [Amigo]  zinc ion transport
GO	zinc ion binding [Amigo]  zinc ion binding
GO	integral to membrane [Amigo]  integral to membrane
GO	metal ion transport [Amigo]  metal ion transport
GO	metal ion transmembrane transporter activity [Amigo]  metal ion transmembrane transporter activity
PubGene	SLC39A6
TreeFam	SLC39A6
CTD	25800 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SLC39A6 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:08:56 2008