SLC5A3 (solute carrier family 5 (inositol transporters), member 3)

Identity

Other names	SMIT
	SMIT2
HGNC	SLC5A3
Location	21q22
Location_base_pair	Starts at 34367740 and ends at 34400431 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SLC5A3   11038
Entrez_Gene	SLC5A3  6526  solute carrier family 5 (inositol transporters), member 3
	Cards
GeneCards	SLC5A3
Ensembl	ENSG00000198743 [Gene_View]  SLC5A3 [Vega]
Genatlas	SLC5A3
	Genomic and cartography
GoldenPath	SLC5A3  -  21q22   chr21:34367740-34400431 +  21q22.11   [Description]    (hg18-March_2006)
Ensembl	SLC5A3 - 21q22.11 [CytoView]
NCBI	Mapview
OMIM	600444 Disease map [OMIM]
HomoloGene	SLC5A3
	Gene and transcription
Genbank	AB074183 [ ENTREZ ]
Genbank	AK024896 [ ENTREZ ]
Genbank	AK026169 [ ENTREZ ]
Genbank	AK055913 [ ENTREZ ]
Genbank	AK092248 [ ENTREZ ]
RefSeq	NM_006933 [ SRS ]    NM_006933 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
CCDS	SLC5A3 CCDS - NCBI
AceView	SLC5A3 AceView - NCBI
Unigene	Hs.302742 [ SRS ]    Hs.302742 [ NCBI ]
Fast-db	2262 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P53794 [ SRS]    P53794 [ EXPASY ]     P53794 [ INTERPRO ]     P53794 [ UNIPROT ] P53794 [ VarSplice FASTA ]
Prosite	PS00456 NA_SOLUT_SYMP_1 [ SRS ]    PS00456 NA_SOLUT_SYMP_1 [ Expasy ]
Prosite	PS00457 NA_SOLUT_SYMP_2 [ SRS ]    PS00457 NA_SOLUT_SYMP_2 [ Expasy ]
Prosite	PS50283 NA_SOLUT_SYMP_3 [ SRS ]    PS50283 NA_SOLUT_SYMP_3 [ Expasy ]
Interpro	IPR001734 Na/solut_symport [ SRS ]    IPR001734 Na/solut_symport [ EBI ]
CluSTr	P53794
Pfam	PF00474 SSF [ SRS ]    PF00474 SSF [ Sanger ]    pfam00474 [ NCBI-CDD ]
Blocks	P53794
HPRD	02708
	Protein Interaction databases
DIP	P53794
IntAct	P53794
	Polymorphism : SNP, mutations, diseases
OMIM	600444    [ map ]
GENETests	600444
SNP	SLC5A3 [dbSNP-NCBI]
SNP	NM_006933 [SNP-NCI]
SNP	SLC5A3 [GeneSNPs - Utah]  SLC5A3] [HGBASE - SRS]
HAPMAP	SLC5A3 [HAPMAP]
HGMD	SLC5A3
Genetic Association	SLC5A3
CDC HuGE	SLC5A3
	General knowledge
Family Browser	SLC5A3 [UCSC Family Browser]
SOURCE	NM_006933
SMD	Hs.302742
SAGE	Hs.302742
GO	transporter activity [Amigo]  transporter activity
GO	myo-inositol:sodium symporter activity [Amigo]  myo-inositol:sodium symporter activity
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	ion transport [Amigo]  ion transport
GO	sodium ion transport [Amigo]  sodium ion transport
GO	peripheral nervous system development [Amigo]  peripheral nervous system development
GO	symporter activity [Amigo]  symporter activity
GO	myo-inositol transport [Amigo]  myo-inositol transport
GO	membrane [Amigo]  membrane
GO	sodium ion binding [Amigo]  sodium ion binding
GO	regulation of respiratory gaseous exchange [Amigo]  regulation of respiratory gaseous exchange
PubGene	SLC5A3
TreeFam	SLC5A3
CTD	6526 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SLC5A3 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:09:01 2008