SLC9A3 (solute carrier family 9 (sodium/hydrogen exchanger), member 3)

Identity

Other names	MGC126718
	MGC126720
	NHE3
HGNC	SLC9A3
Location	5p15.3
Location_base_pair	Starts at 526334 and ends at 577549 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SLC9A3   11073
Entrez_Gene	SLC9A3  6550  solute carrier family 9 (sodium/hydrogen exchanger), member 3
	Cards
GeneCards	SLC9A3
Ensembl	SLC9A3 [Search_View]   ENSG00000066230 [Gene_View]
Genatlas	SLC9A3
GeneLynx	SLC9A3
eGenome	SLC9A3
euGene	6550
	Genomic and cartography
GoldenPath	SLC9A3  -  5p15.3   chr5:526334-577549 -  5p15.33   [Description]    (hg18-March_2006)
Ensembl	SLC9A3 - 5p15.33 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SLC9A3
	Gene and transcription
Genbank	BC011555 [ ENTREZ ]
Genbank	BC101669 [ ENTREZ ]
Genbank	BC101671 [ ENTREZ ]
Genbank	BP270851 [ ENTREZ ]
Genbank	S83545 [ ENTREZ ]
RefSeq	NM_004174 [ SRS ]    NM_004174 [ ENTREZ ]
RefSeq	AC_000048 [ SRS ]    AC_000048 [ ENTREZ ]
RefSeq	AC_000137 [ SRS ]    AC_000137 [ ENTREZ ]
RefSeq	NC_000005 [ SRS ]    NC_000005 [ ENTREZ ]
RefSeq	NT_006576 [ SRS ]    NT_006576 [ ENTREZ ]
RefSeq	NW_001838923 [ SRS ]    NW_001838923 [ ENTREZ ]
RefSeq	NW_922496 [ SRS ]    NW_922496 [ ENTREZ ]
AceView	SLC9A3 AceView - NCBI
Unigene	Hs.658120 [ SRS ]    Hs.658120 [ NCBI ]     HS658120 [ spliceNest ]
Fast-db	765 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O00617 [ SRS]    O00617 [ EXPASY ]     O00617 [ INTERPRO ]     O00617 [ UNIPROT ]
Prosite	PS00678 WD_REPEATS_1 [ SRS ]    PS00678 WD_REPEATS_1 [ Expasy ]
Interpro	IPR006153 Na_H_porter [ SRS ]    IPR006153 Na_H_porter [ EBI ]
Interpro	IPR001118 NaH_exchanger3 [ SRS ]    IPR001118 NaH_exchanger3 [ EBI ]
Interpro	IPR001680 WD40_repeat [ SRS ]    IPR001680 WD40_repeat [ EBI ]
CluSTr	O00617
Pfam	PF00999 Na_H_Exchanger [ SRS ]    PF00999 Na_H_Exchanger [ Sanger ]    pfam00999 [ NCBI-CDD ]
Blocks	O00617
HPRD	01660
	Protein Interaction databases
DIP	O00617
IntAct	O00617
	Polymorphism : SNP, mutations, diseases
OMIM	182307    [ map ]
GENECLINICS	182307
SNP	SLC9A3 [dbSNP-NCBI]
SNP	NM_004174 [SNP-NCI]
SNP	SLC9A3 [GeneSNPs - Utah]  SLC9A3] [HGBASE - SRS]
HAPMAP	SLC9A3 [HAPMAP]
HGMD	SLC9A3
	General knowledge
Family Browser	SLC9A3 [UCSC Family Browser]
SOURCE	NM_004174
SMD	Hs.658120
SAGE	Hs.658120
GO	regulation of sodium ion transport [Amigo]  regulation of sodium ion transport
GO	protein binding [Amigo]  protein binding
GO	ion transport [Amigo]  ion transport
GO	regulation of pH [Amigo]  regulation of pH
GO	receptor-mediated endocytosis [Amigo]  receptor-mediated endocytosis
GO	circadian rhythm [Amigo]  circadian rhythm
GO	antiporter activity [Amigo]  antiporter activity
GO	solute:hydrogen antiporter activity [Amigo]  solute:hydrogen antiporter activity
GO	sodium:hydrogen antiporter activity [Amigo]  sodium:hydrogen antiporter activity
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	apical plasma membrane [Amigo]  apical plasma membrane
GO	sodium ion binding [Amigo]  sodium ion binding
GO	brush border membrane [Amigo]  brush border membrane
PubGene	SLC9A3
TreeFam	SLC9A3
CTD	6550 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SLC9A3 Related clones (RZPD - Berlin)
	PubMed
PubMed	38 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:02:15 2008