SMYD4 (SET and MYND domain containing 4)

Identity

Other names	KIAA1936
	ZMYND21
HGNC	SMYD4
Location	17p13.3
Location_base_pair	Starts at 1629579 and ends at 1679925 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SMYD4   21067
Entrez_Gene	SMYD4  114826  SET and MYND domain containing 4
	Cards
GeneCards	SMYD4
Ensembl	ENSG00000186532 [Gene_View]  SMYD4 [Vega]
Genatlas	SMYD4
	Genomic and cartography
GoldenPath	SMYD4  -  17p13.3   chr17:1629579-1679925 -  17p13.3   [Description]    (hg18-March_2006)
Ensembl	SMYD4 - 17p13.3 [CytoView]
NCBI	Mapview
HomoloGene	SMYD4
	Gene and transcription
Genbank	AB067523 [ ENTREZ ]
Genbank	AK057769 [ ENTREZ ]
Genbank	AK092149 [ ENTREZ ]
Genbank	AK095369 [ ENTREZ ]
Genbank	AL137345 [ ENTREZ ]
RefSeq	NM_052928 [ SRS ]    NM_052928 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
CCDS	SMYD4 CCDS - NCBI
AceView	SMYD4 AceView - NCBI
Unigene	Hs.514602 [ SRS ]    Hs.514602 [ NCBI ]
Fast-db	661 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q8IYR2 [ SRS]    Q8IYR2 [ EXPASY ]     Q8IYR2 [ INTERPRO ]     Q8IYR2 [ UNIPROT ] Q8IYR2 [ VarSplice FASTA ]
Prosite	PS50280 SET [ SRS ]    PS50280 SET [ Expasy ]
Prosite	PS01360 ZF_MYND_1 [ SRS ]    PS01360 ZF_MYND_1 [ Expasy ]
Prosite	PS50865 ZF_MYND_2 [ SRS ]    PS50865 ZF_MYND_2 [ Expasy ]
Interpro	IPR001214 SET [ SRS ]    IPR001214 SET [ EBI ]
Interpro	IPR011990 TPR-like_helical [ SRS ]    IPR011990 TPR-like_helical [ EBI ]
Interpro	IPR002893 Znf_MYND [ SRS ]    IPR002893 Znf_MYND [ EBI ]
CluSTr	Q8IYR2
Pfam	PF00856 SET [ SRS ]    PF00856 SET [ Sanger ]    pfam00856 [ NCBI-CDD ]
Pfam	PF01753 zf-MYND [ SRS ]    PF01753 zf-MYND [ Sanger ]    pfam01753 [ NCBI-CDD ]
Smart	SM00317 SET [EMBL]
Blocks	Q8IYR2
HPRD	18079
	Protein Interaction databases
DIP	Q8IYR2
IntAct	Q8IYR2
	Polymorphism : SNP, mutations, diseases
SNP	SMYD4 [dbSNP-NCBI]
SNP	NM_052928 [SNP-NCI]
SNP	SMYD4 [GeneSNPs - Utah]  SMYD4] [HGBASE - SRS]
HAPMAP	SMYD4 [HAPMAP]
COSMIC	SMYD4 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	SMYD4
Genetic Association	SMYD4
CDC HuGE	SMYD4
	General knowledge
Family Browser	SMYD4 [UCSC Family Browser]
SOURCE	NM_052928
SMD	Hs.514602
SAGE	Hs.514602
GO	binding [Amigo]  binding
GO	nucleus [Amigo]  nucleus
GO	zinc ion binding [Amigo]  zinc ion binding
GO	metal ion binding [Amigo]  metal ion binding
PubGene	SMYD4
TreeFam	SMYD4
CTD	114826 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SMYD4 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:09:21 2008