SNRPN (small nuclear ribonucleoprotein polypeptide N)

Identity

Other names	HCERN3
	RT-LI
	SM-D
	SMN
	SNRNP-N
	SNURF-SNRPN
Hugo	SNRPN
Location	15q11.2
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	SNRPN
GDB	SNRPN
Entrez_Gene	SNRPN  6638  small nuclear ribonucleoprotein polypeptide N
	Cards
GeneCards	SNRPN
Ensembl	SNRPN [Search_View]   ENSG00000143977 [Gene_View]
Genatlas	SNRPN
GeneLynx	SNRPN
eGenome	SNRPN
euGene	6638
	Genomic and cartography
GoldenPath	SNRPN  -  15q11.2   chr15:22652791-22774822 +  15q11.2   [Description]    (hg18-March_2006)
Ensembl	SNRPN - 15q11.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SNRPN
	Gene and transcription
Genbank	AF092911 [ ENTREZ ]
Genbank	AF319523 [ ENTREZ ]
Genbank	AF400432 [ ENTREZ ]
Genbank	AF400485 [ ENTREZ ]
Genbank	AF400486 [ ENTREZ ]
RefSeq	NM_003097 [ SRS ]    NM_003097 [ ENTREZ ]
RefSeq	NM_022805 [ SRS ]    NM_022805 [ ENTREZ ]
RefSeq	NM_022806 [ SRS ]    NM_022806 [ ENTREZ ]
RefSeq	NM_022807 [ SRS ]    NM_022807 [ ENTREZ ]
RefSeq	NM_022808 [ SRS ]    NM_022808 [ ENTREZ ]
RefSeq	AC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeq	NC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeq	NG_002690 [ SRS ]    NG_002690 [ ENTREZ ]
RefSeq	NT_026446 [ SRS ]    NT_026446 [ ENTREZ ]
RefSeq	NW_925783 [ SRS ]    NW_925783 [ ENTREZ ]
AceView	SNRPN AceView - NCBI
Unigene	Hs.632166 [ SRS ]    Hs.632166 [ NCBI ]     HS632166 [ spliceNest ]
Fast-db	395 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P63162 [ SRS]    P63162 [ EXPASY ]     P63162 [ INTERPRO ]
Interpro	IPR006649 Euk_arc_LSM_core [ SRS ]    IPR006649 Euk_arc_LSM_core [ EBI ]
Interpro	IPR001163 LSM_snRNP_core [ SRS ]    IPR001163 LSM_snRNP_core [ EBI ]
CluSTr	P63162
Pfam	PF01423 LSM [ SRS ]    PF01423 LSM [ Sanger ]    pfam01423 [ NCBI-CDD ]
Smart	SM00651 Sm [EMBL]
Prodom	PD020287 snRNP[INRA-Toulouse]
Prodom	P63162 RSMN_HUMAN [ Domain structure ]   P63162 RSMN_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P63162
HPRD	01653
	Protein Interaction databases
DIP	P63162
IntAct	P63162
	Polymorphism : SNP, mutations, diseases
OMIM	176270;182279    [ map ]
GENECLINICS	176270;182279
SNP	SNRPN [dbSNP-NCBI]
SNP	NM_003097 [SNP-NCI]
SNP	NM_022805 [SNP-NCI]
SNP	NM_022806 [SNP-NCI]
SNP	NM_022807 [SNP-NCI]
SNP	NM_022808 [SNP-NCI]
SNP	SNRPN [GeneSNPs - Utah]  SNRPN] [HGBASE - SRS]
HAPMAP	SNRPN [HAPMAP]
HGMD	SNRPN
	General knowledge
Family Browser	SNRPN [UCSC Family Browser]
SOURCE	NM_003097
SOURCE	NM_022805
SOURCE	NM_022806
SOURCE	NM_022807
SOURCE	NM_022808
SMD	Hs.632166
SAGE	Hs.632166
GO	molecular_function [Amigo]  molecular_function
GO	nucleic acid binding [Amigo]  nucleic acid binding
GO	RNA binding [Amigo]  RNA binding
GO	cellular_component [Amigo]  cellular_component
GO	nucleus [Amigo]  nucleus
GO	spliceosome [Amigo]  spliceosome
GO	biological_process [Amigo]  biological_process
GO	RNA splicing [Amigo]  RNA splicing
GO	mRNA metabolic process [Amigo]  mRNA metabolic process
GO	ribonucleoprotein complex [Amigo]  ribonucleoprotein complex
GO	small nuclear ribonucleoprotein complex [Amigo]  small nuclear ribonucleoprotein complex
GO	identical protein binding [Amigo]  identical protein binding
PubGene	SNRPN
TreeFam	SNRPN
CTD	6638 [Comparative Genomics Database]
	Other databases
	Probes
Probe	SNRPN Related clones (RZPD - Berlin)
	PubMed
PubMed	38 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:29:30 2008