SON (SON DNA binding protein)

Identity

Other names	BASS1
	C21orf50
	DBP-5
	FLJ21099
	FLJ33914
	KIAA1019
	NREBP
	SON3
HGNC	SON
Location	21q22.1-q22.2|21q22.11
Location_base_pair	Starts at 33837220 and ends at 33854843 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SON   11183
Entrez_Gene	SON  6651  SON DNA binding protein
	Cards
GeneCards	SON
Ensembl	SON [Search_View]   ENSG00000159140 [Gene_View]
Genatlas	SON
GeneLynx	SON
eGenome	SON
euGene	6651
	Genomic and cartography
GoldenPath	SON  -     chr21:33837220-33854843 +  21q22.11   [Description]    (hg18-March_2006)
Ensembl	SON - 21q22.11 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SON
	Gene and transcription
Genbank	AB028942 [ ENTREZ ]
Genbank	AF139897 [ ENTREZ ]
Genbank	AF161428 [ ENTREZ ]
Genbank	AF161430 [ ENTREZ ]
Genbank	AF380179 [ ENTREZ ]
RefSeq	NM_032195 [ SRS ]    NM_032195 [ ENTREZ ]
RefSeq	NM_138927 [ SRS ]    NM_138927 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	SON AceView - NCBI
Unigene	Hs.517262 [ SRS ]    Hs.517262 [ NCBI ]     HS517262 [ spliceNest ]
Fast-db	2146 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P18583 [ SRS]    P18583 [ EXPASY ]     P18583 [ INTERPRO ]     P18583 [ UNIPROT ]
Prosite	PS50137 DS_RBD [ SRS ]    PS50137 DS_RBD [ Expasy ]
Prosite	PS50174 G_PATCH [ SRS ]    PS50174 G_PATCH [ Expasy ]
Interpro	IPR001159 Ds_RNA_bd [ SRS ]    IPR001159 Ds_RNA_bd [ EBI ]
Interpro	IPR014720 dsRNA-bd-like [ SRS ]    IPR014720 dsRNA-bd-like [ EBI ]
Interpro	IPR000467 G_patch [ SRS ]    IPR000467 G_patch [ EBI ]
CluSTr	P18583
Pfam	PF00035 dsrm [ SRS ]    PF00035 dsrm [ Sanger ]    pfam00035 [ NCBI-CDD ]
Pfam	PF01585 G-patch [ SRS ]    PF01585 G-patch [ Sanger ]    pfam01585 [ NCBI-CDD ]
Smart	SM00443 G_patch [EMBL]
Prodom	PD153432 Csurface_antigen[INRA-Toulouse]
Prodom	P18583 SON_HUMAN [ Domain structure ]   P18583 SON_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P18583
HPRD	01678
	Protein Interaction databases
DIP	P18583
IntAct	P18583
	Polymorphism : SNP, mutations, diseases
OMIM	182465    [ map ]
GENECLINICS	182465
SNP	SON [dbSNP-NCBI]
SNP	NM_032195 [SNP-NCI]
SNP	NM_138927 [SNP-NCI]
SNP	SON [GeneSNPs - Utah]  SON] [HGBASE - SRS]
HAPMAP	SON [HAPMAP]
HGMD	SON
	General knowledge
Family Browser	SON [UCSC Family Browser]
SOURCE	NM_032195
SOURCE	NM_138927
SMD	Hs.517262
SAGE	Hs.517262
GO	DNA binding [Amigo]  DNA binding
GO	double-stranded RNA binding [Amigo]  double-stranded RNA binding
GO	protein binding [Amigo]  protein binding
GO	cellular_component [Amigo]  cellular_component
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	anti-apoptosis [Amigo]  anti-apoptosis
GO	nuclear speck [Amigo]  nuclear speck
PubGene	SON
TreeFam	SON
CTD	6651 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SON Related clones (RZPD - Berlin)
	PubMed
PubMed	27 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:02:39 2008