SPINT1 (serine peptidase inhibitor, Kunitz type 1)

Identity

Other names	HAI
	HAI1
	MANSC2
Hugo	SPINT1
Location	15q15.1
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	SPINT1
GDB	SPINT1
Entrez_Gene	SPINT1  6692  serine peptidase inhibitor, Kunitz type 1
	Cards
GeneCards	SPINT1
Ensembl	SPINT1 [Search_View]   ENSG00000166145 [Gene_View]
Genatlas	SPINT1
GeneLynx	SPINT1
eGenome	SPINT1
euGene	6692
	Genomic and cartography
GoldenPath	SPINT1  -  15q15.1   chr15:38923538-38937144 +  15q15.1   [Description]    (hg18-March_2006)
Ensembl	SPINT1 - 15q15.1 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SPINT1
	Gene and transcription
Genbank	AB000095 [ ENTREZ ]
Genbank	AI684245 [ ENTREZ ]
Genbank	AY296715 [ ENTREZ ]
Genbank	AY358969 [ ENTREZ ]
Genbank	BC004140 [ ENTREZ ]
RefSeq	NM_001032367 [ SRS ]    NM_001032367 [ ENTREZ ]
RefSeq	NM_003710 [ SRS ]    NM_003710 [ ENTREZ ]
RefSeq	NM_181642 [ SRS ]    NM_181642 [ ENTREZ ]
RefSeq	AC_000058 [ SRS ]    AC_000058 [ ENTREZ ]
RefSeq	NC_000015 [ SRS ]    NC_000015 [ ENTREZ ]
RefSeq	NT_010194 [ SRS ]    NT_010194 [ ENTREZ ]
RefSeq	NW_925840 [ SRS ]    NW_925840 [ ENTREZ ]
AceView	SPINT1 AceView - NCBI
Unigene	Hs.233950 [ SRS ]    Hs.233950 [ NCBI ]     HS233950 [ spliceNest ]
Fast-db	2345 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O43278 [ SRS]    O43278 [ EXPASY ]     O43278 [ INTERPRO ]
Prosite	PS00280 BPTI_KUNITZ_1 [ SRS ]    PS00280 BPTI_KUNITZ_1 [ Expasy ]
Prosite	PS50279 BPTI_KUNITZ_2 [ SRS ]    PS50279 BPTI_KUNITZ_2 [ Expasy ]
Prosite	PS01209 LDLRA_1 [ SRS ]    PS01209 LDLRA_1 [ Expasy ]
Prosite	PS50068 LDLRA_2 [ SRS ]    PS50068 LDLRA_2 [ Expasy ]
Prosite	PS50986 MANSC [ SRS ]    PS50986 MANSC [ Expasy ]
Interpro	IPR002172 LDL_rcpt_classA_cys-rich [ SRS ]    IPR002172 LDL_rcpt_classA_cys-rich [ EBI ]
Interpro	IPR013980 MANSC [ SRS ]    IPR013980 MANSC [ EBI ]
Interpro	IPR011106 MANSC_N [ SRS ]    IPR011106 MANSC_N [ EBI ]
Interpro	IPR002223 Prot_inh_Kunz-m [ SRS ]    IPR002223 Prot_inh_Kunz-m [ EBI ]
CluSTr	O43278
Pfam	PF00014 Kunitz_BPTI [ SRS ]    PF00014 Kunitz_BPTI [ Sanger ]    pfam00014 [ NCBI-CDD ]
Pfam	PF00057 Ldl_recept_a [ SRS ]    PF00057 Ldl_recept_a [ Sanger ]    pfam00057 [ NCBI-CDD ]
Pfam	PF07502 MANEC [ SRS ]    PF07502 MANEC [ Sanger ]    pfam07502 [ NCBI-CDD ]
Smart	SM00131 KU [EMBL]
Smart	SM00192 LDLa [EMBL]
Smart	SM00765 MANEC [EMBL]
Prodom	PD000222 Prot_Inh_Kunz-m[INRA-Toulouse]
Prodom	O43278 SPIT1_HUMAN [ Domain structure ]   O43278 SPIT1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	O43278
PDB	1YC0 [ SRS ]    1YC0 [ PdbSum ],   1YC0 [ IMB ]   1YC0 [ RSDB ]
HPRD	05494
	Protein Interaction databases
DIP	O43278
IntAct	O43278
	Polymorphism : SNP, mutations, diseases
OMIM	605123    [ map ]
GENECLINICS	605123
SNP	SPINT1 [dbSNP-NCBI]
SNP	NM_001032367 [SNP-NCI]
SNP	NM_003710 [SNP-NCI]
SNP	NM_181642 [SNP-NCI]
SNP	SPINT1 [GeneSNPs - Utah]  SPINT1] [HGBASE - SRS]
HAPMAP	SPINT1 [HAPMAP]
HGMD	SPINT1
	General knowledge
Family Browser	SPINT1 [UCSC Family Browser]
SOURCE	NM_001032367
SOURCE	NM_003710
SOURCE	NM_181642
SMD	Hs.233950
SAGE	Hs.233950
GO	morphogenesis of a branching structure [Amigo]  morphogenesis of a branching structure
GO	embryonic placenta development [Amigo]  embryonic placenta development
GO	serine-type endopeptidase inhibitor activity [Amigo]  serine-type endopeptidase inhibitor activity
GO	protein binding [Amigo]  protein binding
GO	extracellular region [Amigo]  extracellular region
GO	membrane fraction [Amigo]  membrane fraction
PubGene	SPINT1
TreeFam	SPINT1
CTD	6692 [Comparative Genomics Database]
	Other databases
	Probes
Probe	SPINT1 Related clones (RZPD - Berlin)
	PubMed
PubMed	26 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:29:55 2008