SPON2 (spondin 2, extracellular matrix protein)

Identity

Other names	DIL-1
	DIL1
	M-spondin
	Mindin
Hugo	SPON2
Location	4p16.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	SPON2
GDB	SPON2
Entrez_Gene	SPON2  10417  spondin 2, extracellular matrix protein
	Cards
GeneCards	SPON2
Ensembl	SPON2 [Search_View]   ENSG00000159674 [Gene_View]
Genatlas	SPON2
GeneLynx	SPON2
eGenome	SPON2
euGene	10417
	Genomic and cartography
GoldenPath	SPON2  -  4p16.3   chr4:1150723-1156597 -  4p16.3   [Description]    (hg18-March_2006)
Ensembl	SPON2 - 4p16.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SPON2
	Gene and transcription
Genbank	AB027466 [ ENTREZ ]
Genbank	AK024499 [ ENTREZ ]
Genbank	AK074618 [ ENTREZ ]
Genbank	AK074770 [ ENTREZ ]
Genbank	AK130164 [ ENTREZ ]
RefSeq	NM_001128325 [ SRS ]    NM_001128325 [ ENTREZ ]
RefSeq	NM_012445 [ SRS ]    NM_012445 [ ENTREZ ]
RefSeq	AC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeq	AC_000136 [ SRS ]    AC_000136 [ ENTREZ ]
RefSeq	NC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeq	NT_037622 [ SRS ]    NT_037622 [ ENTREZ ]
RefSeq	NW_001838895 [ SRS ]    NW_001838895 [ ENTREZ ]
RefSeq	NW_921918 [ SRS ]    NW_921918 [ ENTREZ ]
AceView	SPON2 AceView - NCBI
Unigene	Hs.302963 [ SRS ]    Hs.302963 [ NCBI ]     HS302963 [ spliceNest ]
Fast-db	895 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q4W5N4 [ SRS]    Q4W5N4 [ EXPASY ]     Q4W5N4 [ INTERPRO ]
Prosite	PS51020 SPONDIN [ SRS ]    PS51020 SPONDIN [ Expasy ]
Prosite	PS50092 TSP1 [ SRS ]    PS50092 TSP1 [ Expasy ]
Interpro	IPR009465 Spondin_N [ SRS ]    IPR009465 Spondin_N [ EBI ]
Interpro	IPR000884 TSP1 [ SRS ]    IPR000884 TSP1 [ EBI ]
CluSTr	Q4W5N4
Pfam	PF06468 Spond_N [ SRS ]    PF06468 Spond_N [ Sanger ]    pfam06468 [ NCBI-CDD ]
Pfam	PF00090 TSP_1 [ SRS ]    PF00090 TSP_1 [ Sanger ]    pfam00090 [ NCBI-CDD ]
Smart	SM00209 TSP1 [EMBL]
Blocks	Q4W5N4
PDB	SPON2 [ SRS ]    SPON2 [ PdbSum ],   SPON2 [ IMB ]   SPON2 [ RSDB ]
HPRD	16174
	Protein Interaction databases
DIP	Q4W5N4
IntAct	Q4W5N4
	Polymorphism : SNP, mutations, diseases
OMIM	605918    [ map ]
GENECLINICS	605918
SNP	SPON2 [dbSNP-NCBI]
SNP	NM_001128325 [SNP-NCI]
SNP	NM_012445 [SNP-NCI]
SNP	SPON2 [GeneSNPs - Utah]  SPON2] [HGBASE - SRS]
HAPMAP	SPON2 [HAPMAP]
HGMD	SPON2
	General knowledge
Family Browser	SPON2 [UCSC Family Browser]
SOURCE	NM_001128325
SOURCE	NM_012445
SMD	Hs.302963
SAGE	Hs.302963
GO	protein binding [Amigo]  protein binding
GO	extracellular region [Amigo]  extracellular region
GO	proteinaceous extracellular matrix [Amigo]  proteinaceous extracellular matrix
GO	immune response [Amigo]  immune response
GO	cell adhesion [Amigo]  cell adhesion
GO	axon guidance [Amigo]  axon guidance
PubGene	SPON2
TreeFam	SPON2
CTD	10417 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SPON2 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Jul 14 17:28:21 2008