SRY (sex determining region Y)

Identity

Other names	TDF
	TDY
Hugo	SRY
Location	Yp11.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
Hugo	SRY
GDB	SRY
Entrez_Gene	SRY  6736  sex determining region Y
	Cards
GeneCards	SRY
Ensembl	SRY [Search_View]   ENSG00000184895 [Gene_View]
Genatlas	SRY
GeneLynx	SRY
eGenome	SRY
euGene	6736
	Genomic and cartography
GoldenPath	SRY  -  Yp11.3   chrY:2714897-2715792 -  Yp11.31   [Description]    (hg18-March_2006)
Ensembl	SRY - Yp11.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SRY
	Gene and transcription
Genbank	BC074923 [ ENTREZ ]
Genbank	BC074924 [ ENTREZ ]
Genbank	L10101 [ ENTREZ ]
Genbank	S53156 [ ENTREZ ]
Genbank	S56543 [ ENTREZ ]
RefSeq	NM_003140 [ SRS ]    NM_003140 [ ENTREZ ]
RefSeq	AC_000066 [ SRS ]    AC_000066 [ ENTREZ ]
RefSeq	NC_000024 [ SRS ]    NC_000024 [ ENTREZ ]
RefSeq	NT_011896 [ SRS ]    NT_011896 [ ENTREZ ]
RefSeq	NW_927715 [ SRS ]    NW_927715 [ ENTREZ ]
AceView	SRY AceView - NCBI
Unigene	Hs.1992 [ SRS ]    Hs.1992 [ NCBI ]     HS1992 [ spliceNest ]
Fast-db	711 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q05066 [ SRS]    Q05066 [ EXPASY ]     Q05066 [ INTERPRO ]
Prosite	PS50118 HMG_BOX_2 [ SRS ]    PS50118 HMG_BOX_2 [ Expasy ]
Interpro	IPR000910 HMG_1/2_box [ SRS ]    IPR000910 HMG_1/2_box [ EBI ]
CluSTr	Q05066
Pfam	PF00505 HMG_box [ SRS ]    PF00505 HMG_box [ Sanger ]    pfam00505 [ NCBI-CDD ]
Smart	SM00398 HMG [EMBL]
Blocks	Q05066
PDB	1HRY [ SRS ]    1HRY [ PdbSum ],   1HRY [ IMB ]   1HRY [ RSDB ]
PDB	1HRZ [ SRS ]    1HRZ [ PdbSum ],   1HRZ [ IMB ]   1HRZ [ RSDB ]
PDB	1J46 [ SRS ]    1J46 [ PdbSum ],   1J46 [ IMB ]   1J46 [ RSDB ]
PDB	1J47 [ SRS ]    1J47 [ PdbSum ],   1J47 [ IMB ]   1J47 [ RSDB ]
HPRD	08364
	Protein Interaction databases
DIP	Q05066
IntAct	Q05066
	Polymorphism : SNP, mutations, diseases
OMIM	480000    [ map ]
GENECLINICS	480000
SNP	SRY [dbSNP-NCBI]
SNP	NM_003140 [SNP-NCI]
SNP	SRY [GeneSNPs - Utah]  SRY] [HGBASE - SRS]
HAPMAP	SRY [HAPMAP]
HGMD	SRY
	General knowledge
Family Browser	SRY [UCSC Family Browser]
SOURCE	NM_003140
SMD	Hs.1992
SAGE	Hs.1992
GO	DNA binding [Amigo]  DNA binding
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	DNA bending activity [Amigo]  DNA bending activity
GO	transcription activator activity [Amigo]  transcription activator activity
GO	nuclear speck [Amigo]  nuclear speck
GO	cell differentiation [Amigo]  cell differentiation
GO	male sex determination [Amigo]  male sex determination
PubGene	SRY
TreeFam	SRY
CTD	6736 [Comparative Genomics Database]
	Other databases
	Probes
Probe	SRY Related clones (RZPD - Berlin)
	PubMed
PubMed	84 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Thu May 22 20:30:15 2008