SSR1 (signal sequence receptor, alpha (translocon-associated protein alpha))

Identity

Other names	DKFZp781N23103
	FLJ14232
	FLJ22100
	FLJ23034
	FLJ78242
	FLJ93042
	TRAPA
HGNC	SSR1
Location	6p24.3
Location_base_pair	Starts at 7226287 and ends at 7258540 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SSR1   11323
Entrez_Gene	SSR1  6745  signal sequence receptor, alpha (translocon-associated protein alpha)
	Cards
GeneCards	SSR1
Ensembl	ENSG00000124783 [Gene_View]  SSR1 [Vega]
Genatlas	SSR1
	Genomic and cartography
GoldenPath	SSR1  -  6p24.3   chr6:7226287-7258540 -  6p24.3   [Description]    (hg18-March_2006)
Ensembl	SSR1 - 6p24.3 [CytoView]
NCBI	Mapview
OMIM	600868 Disease map [OMIM]
HomoloGene	SSR1
	Gene and transcription
Genbank	AF156965 [ ENTREZ ]
Genbank	AJ420492 [ ENTREZ ]
Genbank	AK024294 [ ENTREZ ]
Genbank	AK025753 [ ENTREZ ]
Genbank	AK026687 [ ENTREZ ]
RefSeq	NM_003144 [ SRS ]    NM_003144 [ ENTREZ ]
RefSeq	AC_000049 [ SRS ]    AC_000049 [ ENTREZ ]
RefSeq	AC_000138 [ SRS ]    AC_000138 [ ENTREZ ]
RefSeq	NC_000006 [ SRS ]    NC_000006 [ ENTREZ ]
RefSeq	NT_034880 [ SRS ]    NT_034880 [ ENTREZ ]
RefSeq	NW_001838973 [ SRS ]    NW_001838973 [ ENTREZ ]
RefSeq	NW_922984 [ SRS ]    NW_922984 [ ENTREZ ]
CCDS	SSR1 CCDS - NCBI
AceView	SSR1 AceView - NCBI
Unigene	Hs.114033 [ SRS ]    Hs.114033 [ NCBI ]
Fast-db	1871 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P43307 [ SRS]    P43307 [ EXPASY ]     P43307 [ INTERPRO ]     P43307 [ UNIPROT ] P43307 [ VarSplice FASTA ]
Interpro	IPR005595 TRAP_alpha [ SRS ]    IPR005595 TRAP_alpha [ EBI ]
CluSTr	P43307
Pfam	PF03896 TRAP_alpha [ SRS ]    PF03896 TRAP_alpha [ Sanger ]    pfam03896 [ NCBI-CDD ]
Blocks	P43307
HPRD	02924
	Protein Interaction databases
DIP	P43307
IntAct	P43307
	Polymorphism : SNP, mutations, diseases
OMIM	600868    [ map ]
GENETests	600868
SNP	SSR1 [dbSNP-NCBI]
SNP	NM_003144 [SNP-NCI]
SNP	SSR1 [GeneSNPs - Utah]  SSR1] [HGBASE - SRS]
HAPMAP	SSR1 [HAPMAP]
HGMD	SSR1
Genetic Association	SSR1
CDC HuGE	SSR1
	General knowledge
Family Browser	SSR1 [UCSC Family Browser]
SOURCE	NM_003144
SMD	Hs.114033
SAGE	Hs.114033
GO	signal sequence binding [Amigo]  signal sequence binding
GO	calcium ion binding [Amigo]  calcium ion binding
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	endoplasmic reticulum membrane [Amigo]  endoplasmic reticulum membrane
GO	cotranslational protein targeting to membrane [Amigo]  cotranslational protein targeting to membrane
GO	positive regulation of cell proliferation [Amigo]  positive regulation of cell proliferation
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
PubGene	SSR1
TreeFam	SSR1
CTD	6745 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SSR1 Related clones (RZPD - Berlin)
	PubMed
PubMed	17 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:10:06 2008