TBC1D1 (TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1)

Identity

Other names	KIAA1108
	TBC
	TBC1
HGNC	TBC1D1
Location	4p14
Location_base_pair	Starts at 37569115 and ends at 37817189 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TBC1D1   11578
Entrez_Gene	TBC1D1  23216  TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
	Cards
GeneCards	TBC1D1
Ensembl	TBC1D1 [Search_View]   ENSG00000065882 [Gene_View]
Genatlas	TBC1D1
GeneLynx	TBC1D1
eGenome	TBC1D1
euGene	23216
	Genomic and cartography
GoldenPath	TBC1D1  -  4p14   chr4:37569115-37817189 +  4p14   [Description]    (hg18-March_2006)
Ensembl	TBC1D1 - 4p14 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TBC1D1
	Gene and transcription
Genbank	AB029031 [ ENTREZ ]
Genbank	AK027355 [ ENTREZ ]
Genbank	AK057182 [ ENTREZ ]
Genbank	AK074954 [ ENTREZ ]
Genbank	BC014529 [ ENTREZ ]
RefSeq	NM_015173 [ SRS ]    NM_015173 [ ENTREZ ]
RefSeq	AC_000047 [ SRS ]    AC_000047 [ ENTREZ ]
RefSeq	AC_000136 [ SRS ]    AC_000136 [ ENTREZ ]
RefSeq	NC_000004 [ SRS ]    NC_000004 [ ENTREZ ]
RefSeq	NT_016297 [ SRS ]    NT_016297 [ ENTREZ ]
RefSeq	NW_001838901 [ SRS ]    NW_001838901 [ ENTREZ ]
RefSeq	NW_922073 [ SRS ]    NW_922073 [ ENTREZ ]
AceView	TBC1D1 AceView - NCBI
Unigene	Hs.176503 [ SRS ]    Hs.176503 [ NCBI ]     HS176503 [ spliceNest ]
Fast-db	3352 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6PJJ8 [ SRS]    Q6PJJ8 [ EXPASY ]     Q6PJJ8 [ INTERPRO ]     Q6PJJ8 [ UNIPROT ]
Prosite	PS00307 LECTIN_LEGUME_BETA [ SRS ]    PS00307 LECTIN_LEGUME_BETA [ Expasy ]
Prosite	PS01179 PID [ SRS ]    PS01179 PID [ Expasy ]
Prosite	PS50086 TBC_RABGAP [ SRS ]    PS50086 TBC_RABGAP [ Expasy ]
Interpro	IPR001220 Lectin_legB [ SRS ]    IPR001220 Lectin_legB [ EBI ]
Interpro	IPR011993 PH_type [ SRS ]    IPR011993 PH_type [ EBI ]
Interpro	IPR006020 PTB_PID [ SRS ]    IPR006020 PTB_PID [ EBI ]
Interpro	IPR000195 RabGAP_TBC [ SRS ]    IPR000195 RabGAP_TBC [ EBI ]
CluSTr	Q6PJJ8
Pfam	PF00566 TBC [ SRS ]    PF00566 TBC [ Sanger ]    pfam00566 [ NCBI-CDD ]
Smart	SM00164 TBC [EMBL]
Blocks	Q6PJJ8
HPRD	18161
	Protein Interaction databases
DIP	Q6PJJ8
IntAct	Q6PJJ8
	Polymorphism : SNP, mutations, diseases
OMIM	609850    [ map ]
GENECLINICS	609850
SNP	TBC1D1 [dbSNP-NCBI]
SNP	NM_015173 [SNP-NCI]
SNP	TBC1D1 [GeneSNPs - Utah]  TBC1D1] [HGBASE - SRS]
HAPMAP	TBC1D1 [HAPMAP]
HGMD	TBC1D1
	General knowledge
Family Browser	TBC1D1 [UCSC Family Browser]
SOURCE	NM_015173
SMD	Hs.176503
SAGE	Hs.176503
GO	GTPase activator activity [Amigo]  GTPase activator activity
GO	Rab GTPase activator activity [Amigo]  Rab GTPase activator activity
GO	intracellular [Amigo]  intracellular
GO	nucleus [Amigo]  nucleus
GO	regulation of Rab GTPase activity [Amigo]  regulation of Rab GTPase activity
PubGene	TBC1D1
TreeFam	TBC1D1
CTD	23216 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TBC1D1 Related clones (RZPD - Berlin)
	PubMed
PubMed	13 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:34:29 2008