TGIF1 (TGFB-induced factor homeobox 1)

Identity

Other names	HPE4
	MGC39747
	MGC5066
	TGIF
HGNC	TGIF1
Location	18p11.31
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TGIF1   11776
Entrez_Gene	TGIF1  7050  TGFB-induced factor homeobox 1
	Cards
GeneCards	TGIF1
Ensembl	TGIF1 [Search_View]   ENSG00000177426 [Gene_View]
Genatlas	TGIF1
GeneLynx	TGIF1
eGenome	TGIF1
euGene	7050
	Genomic and cartography
GoldenPath	TGIF1  -  18p11.31   chr18:3440172-3448406 +  18p11.31   [Description]    (hg18-March_2006)
Ensembl	TGIF1 - 18p11.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TGIF1
	Gene and transcription
Genbank	AF179900 [ ENTREZ ]
Genbank	AI813434 [ ENTREZ ]
Genbank	AK026766 [ ENTREZ ]
Genbank	AK291112 [ ENTREZ ]
Genbank	BC000814 [ ENTREZ ]
RefSeq	NM_003244 [ SRS ]    NM_003244 [ ENTREZ ]
RefSeq	NM_170695 [ SRS ]    NM_170695 [ ENTREZ ]
RefSeq	NM_173207 [ SRS ]    NM_173207 [ ENTREZ ]
RefSeq	NM_173208 [ SRS ]    NM_173208 [ ENTREZ ]
RefSeq	NM_173209 [ SRS ]    NM_173209 [ ENTREZ ]
RefSeq	NM_173210 [ SRS ]    NM_173210 [ ENTREZ ]
RefSeq	NM_173211 [ SRS ]    NM_173211 [ ENTREZ ]
RefSeq	NM_174886 [ SRS ]    NM_174886 [ ENTREZ ]
RefSeq	AC_000061 [ SRS ]    AC_000061 [ ENTREZ ]
RefSeq	AC_000150 [ SRS ]    AC_000150 [ ENTREZ ]
RefSeq	NC_000018 [ SRS ]    NC_000018 [ ENTREZ ]
RefSeq	NG_007447 [ SRS ]    NG_007447 [ ENTREZ ]
RefSeq	NT_010859 [ SRS ]    NT_010859 [ ENTREZ ]
RefSeq	NW_001838461 [ SRS ]    NW_001838461 [ ENTREZ ]
RefSeq	NW_926940 [ SRS ]    NW_926940 [ ENTREZ ]
AceView	TGIF1 AceView - NCBI
Unigene	Hs.373550 [ SRS ]    Hs.373550 [ NCBI ]     HS373550 [ spliceNest ]
Fast-db	747 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q15583 [ SRS]    Q15583 [ EXPASY ]     Q15583 [ INTERPRO ]     Q15583 [ UNIPROT ]
Prosite	PS00027 HOMEOBOX_1 [ SRS ]    PS00027 HOMEOBOX_1 [ Expasy ]
Prosite	PS50071 HOMEOBOX_2 [ SRS ]    PS50071 HOMEOBOX_2 [ Expasy ]
Interpro	IPR001356 Homeobox [ SRS ]    IPR001356 Homeobox [ EBI ]
Interpro	IPR012287 Homeodomain-rel [ SRS ]    IPR012287 Homeodomain-rel [ EBI ]
CluSTr	Q15583
Pfam	PF00046 Homeobox [ SRS ]    PF00046 Homeobox [ Sanger ]    pfam00046 [ NCBI-CDD ]
Smart	SM00389 HOX [EMBL]
Prodom	PD000010 Homeobox[INRA-Toulouse]
Prodom	Q15583 TGIF1_HUMAN [ Domain structure ]   Q15583 TGIF1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q15583
HPRD	04023
	Protein Interaction databases
DIP	Q15583
IntAct	Q15583
	Polymorphism : SNP, mutations, diseases
OMIM	142946;602630;605389    [ map ]
GENECLINICS	142946;602630;605389
SNP	TGIF1 [dbSNP-NCBI]
SNP	NM_003244 [SNP-NCI]
SNP	NM_170695 [SNP-NCI]
SNP	NM_173207 [SNP-NCI]
SNP	NM_173208 [SNP-NCI]
SNP	NM_173209 [SNP-NCI]
SNP	NM_173210 [SNP-NCI]
SNP	NM_173211 [SNP-NCI]
SNP	NM_174886 [SNP-NCI]
SNP	TGIF1 [GeneSNPs - Utah]  TGIF1] [HGBASE - SRS]
HAPMAP	TGIF1 [HAPMAP]
COSMIC	TGIF1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	TGIF1
	General knowledge
Family Browser	TGIF1 [UCSC Family Browser]
SOURCE	NM_003244
SOURCE	NM_170695
SOURCE	NM_173207
SOURCE	NM_173208
SOURCE	NM_173209
SOURCE	NM_173210
SOURCE	NM_173211
SOURCE	NM_174886
SMD	Hs.373550
SAGE	Hs.373550
GO	negative regulation of transcription from RNA polymerase II promoter [Amigo]  negative regulation of transcription from RNA polymerase II promoter
GO	transcription factor activity [Amigo]  transcription factor activity
GO	transcription corepressor activity [Amigo]  transcription corepressor activity
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	multicellular organismal development [Amigo]  multicellular organismal development
GO	sequence-specific DNA binding [Amigo]  sequence-specific DNA binding
PubGene	TGIF1
TreeFam	TGIF1
CTD	7050 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TGIF1 Related clones (RZPD - Berlin)
	PubMed
PubMed	36 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:34:52 2008