TNFSF13 (tumor necrosis factor (ligand) superfamily, member 13)

Identity

Other names	APRIL
	CD256
	TALL2
	TRDL-1
	UNQ383/PRO715
	ligand
HGNC	TNFSF13
Location	17p13.1
Location_base_pair	Starts at 7402340 and ends at 7405642 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TNFSF13   11928
Entrez_Gene	TNFSF13  8741  tumor necrosis factor (ligand) superfamily, member 13
	Cards
GeneCards	TNFSF13
Ensembl	ENSG00000161955 [Gene_View]  TNFSF13 [Vega]
Genatlas	TNFSF13
	Genomic and cartography
GoldenPath	TNFSF13  -  17p13.1   chr17:7402340-7405642 +  17p13.1   [Description]    (hg18-March_2006)
Ensembl	TNFSF13 - 17p13.1 [CytoView]
NCBI	Mapview
OMIM	604472 Disease map [OMIM]
HomoloGene	TNFSF13
	Gene and transcription
Genbank	AF046888 [ ENTREZ ]
Genbank	AF114011 [ ENTREZ ]
Genbank	AF114012 [ ENTREZ ]
Genbank	AF114013 [ ENTREZ ]
Genbank	AF136294 [ ENTREZ ]
RefSeq	NM_003808 [ SRS ]    NM_003808 [ ENTREZ ]
RefSeq	NM_172087 [ SRS ]    NM_172087 [ ENTREZ ]
RefSeq	NM_172088 [ SRS ]    NM_172088 [ ENTREZ ]
RefSeq	AC_000060 [ SRS ]    AC_000060 [ ENTREZ ]
RefSeq	AC_000149 [ SRS ]    AC_000149 [ ENTREZ ]
RefSeq	NC_000017 [ SRS ]    NC_000017 [ ENTREZ ]
RefSeq	NT_010718 [ SRS ]    NT_010718 [ ENTREZ ]
RefSeq	NW_001838403 [ SRS ]    NW_001838403 [ ENTREZ ]
RefSeq	NW_926584 [ SRS ]    NW_926584 [ ENTREZ ]
CCDS	TNFSF13 CCDS - NCBI
AceView	TNFSF13 AceView - NCBI
Unigene	Hs.54673 [ SRS ]    Hs.54673 [ NCBI ]
Fast-db	3073 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O75888 [ SRS]    O75888 [ EXPASY ]     O75888 [ INTERPRO ]     O75888 [ UNIPROT ] O75888 [ VarSplice FASTA ]
Prosite	PS00251 TNF_1 [ SRS ]    PS00251 TNF_1 [ Expasy ]
Prosite	PS50049 TNF_2 [ SRS ]    PS50049 TNF_2 [ Expasy ]
Interpro	IPR006052 TNF_family [ SRS ]    IPR006052 TNF_family [ EBI ]
Interpro	IPR008983 Tumour_necrosis_fac-like [ SRS ]    IPR008983 Tumour_necrosis_fac-like [ EBI ]
CluSTr	O75888
Pfam	PF00229 TNF [ SRS ]    PF00229 TNF [ Sanger ]    pfam00229 [ NCBI-CDD ]
Smart	SM00207 TNF [EMBL]
Blocks	O75888
	Protein Interaction databases
DIP	O75888
IntAct	O75888
	Polymorphism : SNP, mutations, diseases
OMIM	604472    [ map ]
GENETests	604472
SNP	TNFSF13 [dbSNP-NCBI]
SNP	NM_003808 [SNP-NCI]
SNP	NM_172087 [SNP-NCI]
SNP	NM_172088 [SNP-NCI]
SNP	TNFSF13 [GeneSNPs - Utah]  TNFSF13] [HGBASE - SRS]
HAPMAP	TNFSF13 [HAPMAP]
COSMIC	TNFSF13 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	TNFSF13
Genetic Association	TNFSF13
CDC HuGE	TNFSF13
	General knowledge
Family Browser	TNFSF13 [UCSC Family Browser]
SOURCE	NM_003808
SOURCE	NM_172087
SOURCE	NM_172088
SMD	Hs.54673
SAGE	Hs.54673
GO	cytokine activity [Amigo]  cytokine activity
GO	tumor necrosis factor receptor binding [Amigo]  tumor necrosis factor receptor binding
GO	extracellular region [Amigo]  extracellular region
GO	extracellular space [Amigo]  extracellular space
GO	immune response [Amigo]  immune response
GO	signal transduction [Amigo]  signal transduction
GO	positive regulation of cell proliferation [Amigo]  positive regulation of cell proliferation
GO	membrane [Amigo]  membrane
GO	positive regulation of isotype switching to IgA isotypes [Amigo]  positive regulation of isotype switching to IgA isotypes
BIOCARTA	Induction of apoptosis through DR3 and DR4/5 Death Receptors    [Genes]
KEGG	Cytokine-cytokine receptor interaction
PubGene	TNFSF13
TreeFam	TNFSF13
CTD	8741 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TNFSF13 Related clones (RZPD - Berlin)
	PubMed
PubMed	56 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Dec 6 17:12:22 2008