TPI1 (triosephosphate isomerase 1)

Identity

Other names	MGC88108
	TPI
HGNC	TPI1
Location	12p13
Location_base_pair	Starts at 6846967 and ends at 6850253 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TPI1   12009
Entrez_Gene	TPI1  7167  triosephosphate isomerase 1
	Cards
GeneCards	TPI1
Ensembl	TPI1 [Search_View]   ENSG00000111669 [Gene_View]
Genatlas	TPI1
GeneLynx	TPI1
eGenome	TPI1
euGene	7167
	Genomic and cartography
GoldenPath	TPI1  -  12p13   chr12:6846967-6850253 +  12p13.31   [Description]    (hg18-March_2006)
Ensembl	TPI1 - 12p13.31 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TPI1
	Gene and transcription
Genbank	AK129488 [ ENTREZ ]
Genbank	AK222638 [ ENTREZ ]
Genbank	AK300661 [ ENTREZ ]
Genbank	AK313282 [ ENTREZ ]
Genbank	BC007086 [ ENTREZ ]
RefSeq	NM_000365 [ SRS ]    NM_000365 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838050 [ SRS ]    NW_001838050 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	TPI1 AceView - NCBI
Unigene	Hs.524219 [ SRS ]    Hs.524219 [ NCBI ]     HS524219 [ spliceNest ]
Fast-db	1405 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P60174 [ SRS]    P60174 [ EXPASY ]     P60174 [ INTERPRO ]     P60174 [ UNIPROT ]
Prosite	PS00171 TIM [ SRS ]    PS00171 TIM [ Expasy ]
Interpro	IPR013785 Aldolase_TIM [ SRS ]    IPR013785 Aldolase_TIM [ EBI ]
Interpro	IPR000652 Triophos_ismrse [ SRS ]    IPR000652 Triophos_ismrse [ EBI ]
CluSTr	P60174
Pfam	PF00121 TIM [ SRS ]    PF00121 TIM [ Sanger ]    pfam00121 [ NCBI-CDD ]
Prodom	PD001005 Triophos_ismrse[INRA-Toulouse]
Prodom	P60174 TPIS_HUMAN [ Domain structure ]   P60174 TPIS_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P60174
PDB	1HTI [ SRS ]    1HTI [ PdbSum ],   1HTI [ IMB ]   1HTI [ RSDB ]
PDB	1WYI [ SRS ]    1WYI [ PdbSum ],   1WYI [ IMB ]   1WYI [ RSDB ]
PDB	2IAM [ SRS ]    2IAM [ PdbSum ],   2IAM [ IMB ]   2IAM [ RSDB ]
PDB	2IAN [ SRS ]    2IAN [ PdbSum ],   2IAN [ IMB ]   2IAN [ RSDB ]
PDB	2VOM [ SRS ]    2VOM [ PdbSum ],   2VOM [ IMB ]   2VOM [ RSDB ]
HPRD	01833
	Protein Interaction databases
DIP	P60174
IntAct	P60174
	Polymorphism : SNP, mutations, diseases
OMIM	190450    [ map ]
GENECLINICS	190450
SNP	TPI1 [dbSNP-NCBI]
SNP	NM_000365 [SNP-NCI]
SNP	TPI1 [GeneSNPs - Utah]  TPI1] [HGBASE - SRS]
HAPMAP	TPI1 [HAPMAP]
COSMIC	TPI1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	TPI1
	General knowledge
Family Browser	TPI1 [UCSC Family Browser]
SOURCE	NM_000365
SMD	Hs.524219
SAGE	Hs.524219
Enzyme	5.3.1.1 [ Enzyme-Expasy ]   5.3.1.1 [ Enzyme-SRS ]   5.3.1.1 [ IntEnz-EBI ]   5.3.1.1 [ BRENDA ]   5.3.1.1 [ KEGG ]   5.3.1.1 [ WIT ]
GO	triose-phosphate isomerase activity [Amigo]  triose-phosphate isomerase activity
GO	triose-phosphate isomerase activity [Amigo]  triose-phosphate isomerase activity
GO	triose-phosphate isomerase activity [Amigo]  triose-phosphate isomerase activity
GO	cytosol [Amigo]  cytosol
GO	gluconeogenesis [Amigo]  gluconeogenesis
GO	glycolysis [Amigo]  glycolysis
GO	pentose-phosphate shunt [Amigo]  pentose-phosphate shunt
GO	fatty acid biosynthetic process [Amigo]  fatty acid biosynthetic process
GO	metabolic process [Amigo]  metabolic process
GO	isomerase activity [Amigo]  isomerase activity
GO	glyceraldehyde-3-phosphate metabolic process [Amigo]  glyceraldehyde-3-phosphate metabolic process
BIOCARTA	Glycolysis Pathway    [Genes]
KEGG	Glycolysis / Gluconeogenesis
KEGG	Inositol metabolism
KEGG	Fructose and mannose metabolism
KEGG	Carbon fixation
PubGene	TPI1
TreeFam	TPI1
CTD	7167 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TPI1 Related clones (RZPD - Berlin)
	PubMed
PubMed	44 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:36:03 2008