TRDMT1 (tRNA aspartic acid methyltransferase 1)

Identity

Other names	DNMT2
	M.HsaIIP
	PuMet
	RNMT1
HGNC	TRDMT1
Location	10p15.1
Location_base_pair	Starts at 17224988 and ends at 17283687 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TRDMT1   2977
Entrez_Gene	TRDMT1  1787  tRNA aspartic acid methyltransferase 1
	Cards
GeneCards	TRDMT1
Ensembl	TRDMT1 [Search_View]   ENSG00000107614 [Gene_View]
Genatlas	TRDMT1
GeneLynx	TRDMT1
eGenome	TRDMT1
euGene	1787
	Genomic and cartography
GoldenPath	TRDMT1  -  10p15.1   chr10:17224988-17283687 -  10p13   [Description]    (hg18-March_2006)
Ensembl	TRDMT1 - 10p13 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TRDMT1
	Gene and transcription
Genbank	AF012128 [ ENTREZ ]
Genbank	AF045888 [ ENTREZ ]
Genbank	AF329940 [ ENTREZ ]
Genbank	AF329941 [ ENTREZ ]
Genbank	AF329942 [ ENTREZ ]
RefSeq	NM_004412 [ SRS ]    NM_004412 [ ENTREZ ]
RefSeq	NM_176081 [ SRS ]    NM_176081 [ ENTREZ ]
RefSeq	NM_176083 [ SRS ]    NM_176083 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	TRDMT1 AceView - NCBI
Unigene	Hs.351665 [ SRS ]    Hs.351665 [ NCBI ]     HS351665 [ spliceNest ]
Fast-db	4237 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O14717 [ SRS]    O14717 [ EXPASY ]     O14717 [ INTERPRO ]     O14717 [ UNIPROT ]
Prosite	PS00094 C5_MTASE_1 [ SRS ]    PS00094 C5_MTASE_1 [ Expasy ]
Prosite	PS00095 C5_MTASE_2 [ SRS ]    PS00095 C5_MTASE_2 [ Expasy ]
Interpro	IPR001525 C5_DNA_meth [ SRS ]    IPR001525 C5_DNA_meth [ EBI ]
CluSTr	O14717
Pfam	PF00145 DNA_methylase [ SRS ]    PF00145 DNA_methylase [ Sanger ]    pfam00145 [ NCBI-CDD ]
Blocks	O14717
PDB	1G55 [ SRS ]    1G55 [ PdbSum ],   1G55 [ IMB ]   1G55 [ RSDB ]
HPRD	16001
	Protein Interaction databases
DIP	O14717
IntAct	O14717
	Polymorphism : SNP, mutations, diseases
OMIM	602478    [ map ]
GENECLINICS	602478
SNP	TRDMT1 [dbSNP-NCBI]
SNP	NM_004412 [SNP-NCI]
SNP	NM_176081 [SNP-NCI]
SNP	NM_176083 [SNP-NCI]
SNP	TRDMT1 [GeneSNPs - Utah]  TRDMT1] [HGBASE - SRS]
HAPMAP	TRDMT1 [HAPMAP]
COSMIC	TRDMT1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	TRDMT1
	General knowledge
Family Browser	TRDMT1 [UCSC Family Browser]
SOURCE	NM_004412
SOURCE	NM_176081
SOURCE	NM_176083
SMD	Hs.351665
SAGE	Hs.351665
Enzyme	2.1.1.29 [ Enzyme-Expasy ]   2.1.1.29 [ Enzyme-SRS ]   2.1.1.29 [ IntEnz-EBI ]   2.1.1.29 [ BRENDA ]   2.1.1.29 [ KEGG ]   2.1.1.29 [ WIT ]
GO	DNA binding [Amigo]  DNA binding
GO	RNA binding [Amigo]  RNA binding
GO	DNA (cytosine-5-)-methyltransferase activity [Amigo]  DNA (cytosine-5-)-methyltransferase activity
GO	nucleus [Amigo]  nucleus
GO	DNA methylation [Amigo]  DNA methylation
GO	tRNA processing [Amigo]  tRNA processing
GO	methyltransferase activity [Amigo]  methyltransferase activity
GO	tRNA (cytosine-5-)-methyltransferase activity [Amigo]  tRNA (cytosine-5-)-methyltransferase activity
GO	transferase activity [Amigo]  transferase activity
PubGene	TRDMT1
TreeFam	TRDMT1
CTD	1787 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TRDMT1 Related clones (RZPD - Berlin)
	PubMed
PubMed	15 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 15:05:47 2008