TRGV9 (T cell receptor gamma variable 9)

Identity

Other names	MGC47828
	TCRGV9
	V2
HGNC	TRGV9
Location	7p14
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TRGV9   12295
Entrez_Gene	TRGV9  6983  T cell receptor gamma variable 9
	Cards
GeneCards	TRGV9
Ensembl	TRGV9 [Search_View]   ENSG00000119913 [Gene_View]
Genatlas	TRGV9
GeneLynx	TRGV9
eGenome	TRGV9
euGene	6983
	Genomic and cartography
GoldenPath	TRGV9  -  7p14   chr7:38265767-38279758 -  7p14.1   [Description]    (hg18-March_2006)
Ensembl	TRGV9 - 7p14.1 [CytoView]
NCBI	Mapview
HomoloGene	TRGV9
	Gene and transcription
Genbank	BC062761 [ ENTREZ ]
Genbank	BC072387 [ ENTREZ ]
Genbank	BC072396 [ ENTREZ ]
Genbank	M16768 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NG_001336 [ SRS ]    NG_001336 [ ENTREZ ]
RefSeq	NT_007819 [ SRS ]    NT_007819 [ ENTREZ ]
RefSeq	NT_079592 [ SRS ]    NT_079592 [ ENTREZ ]
RefSeq	NW_001839003 [ SRS ]    NW_001839003 [ ENTREZ ]
RefSeq	NW_923240 [ SRS ]    NW_923240 [ ENTREZ ]
AceView	TRGV9 AceView - NCBI
Unigene	Hs.534032 [ SRS ]    Hs.534032 [ NCBI ]     HS534032 [ spliceNest ]
Fast-db	18031 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q6IN96 [ SRS]    Q6IN96 [ EXPASY ]     Q6IN96 [ INTERPRO ]     Q6IN96 [ UNIPROT ]
Prosite	PS50835 IG_LIKE [ SRS ]    PS50835 IG_LIKE [ Expasy ]
Interpro	IPR007110 Ig-like [ SRS ]    IPR007110 Ig-like [ EBI ]
Interpro	IPR013783 Ig-like_fold [ SRS ]    IPR013783 Ig-like_fold [ EBI ]
Interpro	IPR003597 Ig_C1-set [ SRS ]    IPR003597 Ig_C1-set [ EBI ]
Interpro	IPR013106 Ig_V-set [ SRS ]    IPR013106 Ig_V-set [ EBI ]
Interpro	IPR003596 Ig_V-set_sub [ SRS ]    IPR003596 Ig_V-set_sub [ EBI ]
CluSTr	Q6IN96
Pfam	PF07686 V-set [ SRS ]    PF07686 V-set [ Sanger ]    pfam07686 [ NCBI-CDD ]
Smart	SM00407 IGc1 [EMBL]
Smart	SM00406 IGv [EMBL]
Blocks	Q6IN96
	Protein Interaction databases
DIP	Q6IN96
IntAct	Q6IN96
	Polymorphism : SNP, mutations, diseases
SNP	TRGV9 [dbSNP-NCBI]
SNP	TRGV9 [GeneSNPs - Utah]  TRGV9] [HGBASE - SRS]
HAPMAP	TRGV9 [HAPMAP]
HGMD	TRGV9
	General knowledge
Family Browser	TRGV9 [UCSC Family Browser]
SMD	Hs.534032
SAGE	Hs.534032
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	MHC protein binding [Amigo]  MHC protein binding
GO	peptide antigen binding [Amigo]  peptide antigen binding
PubGene	TRGV9
TreeFam	TRGV9
CTD	6983 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TRGV9 Related clones (RZPD - Berlin)
	PubMed
PubMed	10 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:36:20 2008