TRPM5 (transient receptor potential cation channel, subfamily M, member 5)

Identity

Other names	LTRPC5
	MTR1
HGNC	TRPM5
Location	11p15.5
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TRPM5   14323
Entrez_Gene	TRPM5  29850  transient receptor potential cation channel, subfamily M, member 5
	Cards
GeneCards	TRPM5
Ensembl	TRPM5 [Search_View]   ENSG00000070985 [Gene_View]
Genatlas	TRPM5
GeneLynx	TRPM5
eGenome	TRPM5
euGene	29850
	Genomic and cartography
GoldenPath	TRPM5  -  11p15.5   chr11:2382322-2400851 -  11p15.5   [Description]    (hg18-March_2006)
Ensembl	TRPM5 - 11p15.5 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TRPM5
	Gene and transcription
Genbank	AF177473 [ ENTREZ ]
Genbank	AJ270996 [ ENTREZ ]
Genbank	BC093787 [ ENTREZ ]
Genbank	BC093789 [ ENTREZ ]
RefSeq	NM_014555 [ SRS ]    NM_014555 [ ENTREZ ]
RefSeq	AC_000054 [ SRS ]    AC_000054 [ ENTREZ ]
RefSeq	AC_000143 [ SRS ]    AC_000143 [ ENTREZ ]
RefSeq	NC_000011 [ SRS ]    NC_000011 [ ENTREZ ]
RefSeq	NT_009237 [ SRS ]    NT_009237 [ ENTREZ ]
RefSeq	NW_001838018 [ SRS ]    NW_001838018 [ ENTREZ ]
RefSeq	NW_924962 [ SRS ]    NW_924962 [ ENTREZ ]
AceView	TRPM5 AceView - NCBI
Unigene	Hs.272287 [ SRS ]    Hs.272287 [ NCBI ]     HS272287 [ spliceNest ]
Fast-db	963 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9NZQ8 [ SRS]    Q9NZQ8 [ EXPASY ]     Q9NZQ8 [ INTERPRO ]     Q9NZQ8 [ UNIPROT ]
Interpro	IPR005821 Ion_trans [ SRS ]    IPR005821 Ion_trans [ EBI ]
CluSTr	Q9NZQ8
Pfam	PF00520 Ion_trans [ SRS ]    PF00520 Ion_trans [ Sanger ]    pfam00520 [ NCBI-CDD ]
Blocks	Q9NZQ8
HPRD	16064
	Protein Interaction databases
DIP	Q9NZQ8
IntAct	Q9NZQ8
	Polymorphism : SNP, mutations, diseases
OMIM	604600    [ map ]
GENECLINICS	604600
SNP	TRPM5 [dbSNP-NCBI]
SNP	NM_014555 [SNP-NCI]
SNP	TRPM5 [GeneSNPs - Utah]  TRPM5] [HGBASE - SRS]
HAPMAP	TRPM5 [HAPMAP]
HGMD	TRPM5
	General knowledge
Family Browser	TRPM5 [UCSC Family Browser]
SOURCE	NM_014555
SMD	Hs.272287
SAGE	Hs.272287
GO	receptor activity [Amigo]  receptor activity
GO	voltage-gated ion channel activity [Amigo]  voltage-gated ion channel activity
GO	plasma membrane [Amigo]  plasma membrane
GO	ion transport [Amigo]  ion transport
GO	integral to membrane [Amigo]  integral to membrane
KEGG	Taste transduction
PubGene	TRPM5
TreeFam	TRPM5
CTD	29850 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TRPM5 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:36:35 2008