TSSC1 (tumor suppressing subtransferable candidate 1)

Identity

Other names	-
HGNC	TSSC1
Location	2p25.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	TSSC1   12383
Entrez_Gene	TSSC1  7260  tumor suppressing subtransferable candidate 1
	Cards
GeneCards	TSSC1
Ensembl	TSSC1 [Search_View]   ENSG00000032389 [Gene_View]
Genatlas	TSSC1
GeneLynx	TSSC1
eGenome	TSSC1
euGene	7260
	Genomic and cartography
GoldenPath	TSSC1  -  2p25.3   chr2:3171750-3360605 -  2p25.3   [Description]    (hg18-March_2006)
Ensembl	TSSC1 - 2p25.3 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	TSSC1
	Gene and transcription
Genbank	AF019952 [ ENTREZ ]
Genbank	AK026522 [ ENTREZ ]
Genbank	AK126288 [ ENTREZ ]
Genbank	AK222652 [ ENTREZ ]
Genbank	BC002485 [ ENTREZ ]
RefSeq	NM_003310 [ SRS ]    NM_003310 [ ENTREZ ]
RefSeq	AC_000045 [ SRS ]    AC_000045 [ ENTREZ ]
RefSeq	AC_000134 [ SRS ]    AC_000134 [ ENTREZ ]
RefSeq	NC_000002 [ SRS ]    NC_000002 [ ENTREZ ]
RefSeq	NT_022221 [ SRS ]    NT_022221 [ ENTREZ ]
RefSeq	NW_001838763 [ SRS ]    NW_001838763 [ ENTREZ ]
RefSeq	NW_927719 [ SRS ]    NW_927719 [ ENTREZ ]
AceView	TSSC1 AceView - NCBI
Unigene	Hs.502770 [ SRS ]    Hs.502770 [ NCBI ]     HS502770 [ spliceNest ]
Fast-db	926 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q53HC9 [ SRS]    Q53HC9 [ EXPASY ]     Q53HC9 [ INTERPRO ]     Q53HC9 [ UNIPROT ]
Prosite	PS00678 WD_REPEATS_1 [ SRS ]    PS00678 WD_REPEATS_1 [ Expasy ]
Prosite	PS50082 WD_REPEATS_2 [ SRS ]    PS50082 WD_REPEATS_2 [ Expasy ]
Prosite	PS50294 WD_REPEATS_REGION [ SRS ]    PS50294 WD_REPEATS_REGION [ Expasy ]
Interpro	IPR015943 WD40/YVTN_repeat-like [ SRS ]    IPR015943 WD40/YVTN_repeat-like [ EBI ]
Interpro	IPR001680 WD40_repeat [ SRS ]    IPR001680 WD40_repeat [ EBI ]
CluSTr	Q53HC9
Pfam	PF00400 WD40 [ SRS ]    PF00400 WD40 [ Sanger ]    pfam00400 [ NCBI-CDD ]
Smart	SM00320 WD40 [EMBL]
Blocks	Q53HC9
HPRD	10287
	Protein Interaction databases
DIP	Q53HC9
IntAct	Q53HC9
	Polymorphism : SNP, mutations, diseases
OMIM	608998    [ map ]
GENECLINICS	608998
SNP	TSSC1 [dbSNP-NCBI]
SNP	NM_003310 [SNP-NCI]
SNP	TSSC1 [GeneSNPs - Utah]  TSSC1] [HGBASE - SRS]
HAPMAP	TSSC1 [HAPMAP]
HGMD	TSSC1
	General knowledge
Family Browser	TSSC1 [UCSC Family Browser]
SOURCE	NM_003310
SMD	Hs.502770
SAGE	Hs.502770
GO	protein binding [Amigo]  protein binding
PubGene	TSSC1
TreeFam	TSSC1
CTD	7260 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TSSC1 Related clones (RZPD - Berlin)
	PubMed
PubMed	8 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:36:46 2008