TXNDC5 (thioredoxin domain containing 5)

Identity

Other names	ERP46
	EndoPDI
	MGC3178
	UNQ364
HGNC	TXNDC5
Location	6p24.3
Location_base_pair	Starts at 7826751 and ends at 8009596 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	TXNDC5   21073
Entrez_Gene	TXNDC5  81567  thioredoxin domain containing 5
	Cards
GeneCards	TXNDC5
Ensembl	TXNDC5 [Search_View]   ENSG00000188428 [Gene_View]
Genatlas	TXNDC5
GeneLynx	TXNDC5
eGenome	TXNDC5
euGene	81567
	Genomic and cartography
GoldenPath	TXNDC5  -  6p24.3   chr6:7826751-8009596 -  6p24.3   [Description]    (hg18-March_2006)
Ensembl	TXNDC5 - 6p24.3 [CytoView]
NCBI	Mapview
HomoloGene	TXNDC5
	Gene and transcription
Genbank	AJ440721 [ ENTREZ ]
Genbank	AK025006 [ ENTREZ ]
Genbank	AK075291 [ ENTREZ ]
Genbank	AK098089 [ ENTREZ ]
Genbank	AK315598 [ ENTREZ ]
RefSeq	NM_022085 [ SRS ]    NM_022085 [ ENTREZ ]
RefSeq	NM_030810 [ SRS ]    NM_030810 [ ENTREZ ]
RefSeq	AC_000049 [ SRS ]    AC_000049 [ ENTREZ ]
RefSeq	AC_000138 [ SRS ]    AC_000138 [ ENTREZ ]
RefSeq	NC_000006 [ SRS ]    NC_000006 [ ENTREZ ]
RefSeq	NT_034880 [ SRS ]    NT_034880 [ ENTREZ ]
RefSeq	NW_001838973 [ SRS ]    NW_001838973 [ ENTREZ ]
RefSeq	NW_922984 [ SRS ]    NW_922984 [ ENTREZ ]
AceView	TXNDC5 AceView - NCBI
Unigene	Hs.150837 [ SRS ]    Hs.150837 [ NCBI ]     HS150837 [ spliceNest ]
Fast-db	2046 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q658S9 [ SRS]    Q658S9 [ EXPASY ]     Q658S9 [ INTERPRO ]     Q658S9 [ UNIPROT ]
Prosite	PS00014 ER_TARGET [ SRS ]    PS00014 ER_TARGET [ Expasy ]
Prosite	PS00194 THIOREDOXIN [ SRS ]    PS00194 THIOREDOXIN [ Expasy ]
Interpro	IPR005788 Disulph_isom [ SRS ]    IPR005788 Disulph_isom [ EBI ]
Interpro	IPR000886 ER_targeting_sequence [ SRS ]    IPR000886 ER_targeting_sequence [ EBI ]
Interpro	IPR006662 Thiored [ SRS ]    IPR006662 Thiored [ EBI ]
Interpro	IPR013766 Thioredoxin_dom [ SRS ]    IPR013766 Thioredoxin_dom [ EBI ]
Interpro	IPR012335 Thioredoxin_fold [ SRS ]    IPR012335 Thioredoxin_fold [ EBI ]
CluSTr	Q658S9
Pfam	PF00085 Thioredoxin [ SRS ]    PF00085 Thioredoxin [ Sanger ]    pfam00085 [ NCBI-CDD ]
Blocks	Q658S9
HPRD	18249
	Protein Interaction databases
DIP	Q658S9
IntAct	Q658S9
	Polymorphism : SNP, mutations, diseases
SNP	TXNDC5 [dbSNP-NCBI]
SNP	NM_022085 [SNP-NCI]
SNP	NM_030810 [SNP-NCI]
SNP	TXNDC5 [GeneSNPs - Utah]  TXNDC5] [HGBASE - SRS]
HAPMAP	TXNDC5 [HAPMAP]
HGMD	TXNDC5
	General knowledge
Family Browser	TXNDC5 [UCSC Family Browser]
SOURCE	NM_022085
SOURCE	NM_030810
SMD	Hs.150837
SAGE	Hs.150837
GO	endoplasmic reticulum [Amigo]  endoplasmic reticulum
GO	endoplasmic reticulum lumen [Amigo]  endoplasmic reticulum lumen
GO	anti-apoptosis [Amigo]  anti-apoptosis
GO	isomerase activity [Amigo]  isomerase activity
GO	cell redox homeostasis [Amigo]  cell redox homeostasis
PubGene	TXNDC5
TreeFam	TXNDC5
CTD	81567 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	TXNDC5 Related clones (RZPD - Berlin)
	PubMed
PubMed	11 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:36:51 2008